Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1784 ATGGAGGAGAAATGCCGTGTCGCTGCGTCTCATCCTCCACCCGCCGCCAATTCACCTGTACCAGAGCAATCATCCACGCGCCGCCGCGCTGGAGGTCAGAAAAGGAAGGCCAATGCTCTCAACGCCTCCAATTCTTCGTCCACGCCCTCCAAACGCGCCACTCGTGAAAAGGCCTCACAACTTCATCGTTCTCCCCTCCACAACGGCCCGTTGACTAGGGCCCGTCAAATCCCCACCAACCTCTCCGCCGCTGCCCCCGCCGATGCTTCCTCTTTGGCGGCAAGTGGCGGTTCCGCTTCTGCCACAGCCATTGTGAAACACACGGATCATGCGGCGCAGAAACAAGGTTTGGGCGGAGATTCGGTCGTGGTGGCGGAGGAAATTAAGAAGGAGAGCAAATGGGAGTCTGTGGAAGCTGCAATTGAAGCTGAATTCGAAGCTATTAGATCTCGTGGAACCAATGCTCATGTGGTTCCCACTCATTGTGGTTGGTTTTCCTGGACTGATATTCATCCAATTGAGAATTCGACATTGCCTTCTTTCTTTAATGGCAAAACTGAAAACCGGACTCCTGATGCATACATGATGATACGAAATTGCATAATAAAGAAGTTTCATGAAAATCCAAACATACAAGTTGAGTTGAAAGATTTGTCAGAGCTCAATGGTGGAGACTTGAATGCTAGGCAAGAGGTGATGGAGTTTCTGGACTATTGGGGTTTAATTAATTTCCACCCATTTCCTGCTATGGGTTCTGCTGTGGCCAATGCTAGTGATGATGGGGAAGCAGAAGTTAGTTCTCTGCTTGAAAAGTTGTATCACATTGAAACACCCCAATTATGTCCGCCTGTTGTTCAAAAACCTAGCCTAACGACTCCAGCTATGACCTCTGGCTTGTTTCCAGAGTCTACAATTGCCGGGGAGTTAGTGAAACAGGAGGGCCCAGCAGTTGAGATGCTTGAATATCATTGCAACTCTTGTGCTGCCGATTGTTCTTGCAAACGTTACCATTGCCAGAAACAGGCAGATTTTGATCTATGCACCGACTGCTTTAGTAATAGAAGATTTGGCTCTGGCATGTCTTCATTGGATTTCATACTCATGGAGCCAGCTGAAGCTGCAGGGTTTAGTGGTGGGAAGTGGACTGATCAGGAGACACTCCTGCTCCTTGAAGCACTGGAACTTTATAAAGAAAATTGGAATGAAATTGTAGAACATGTTGGGACAAAATCCAAAGCTGAATGCATATTACACTTTGTTCAAATGCCAATTGTGGATGCCTTTATTGATTCCGATGATGATGTTTATGCCACTTTCAAAGAAACGGCAGATCCGACTGCAACTAACAATTATTCATCATTGCAAAAAGATGCTTCAGAGGATGCTGAGAATAATGCTAATGATAGCATTGAAGGCCATGATGAAACTTCCAATGCTGGAAATGATAAAGTAAAAGTTAATCAAGAGTCCCCAAAGCTAGAAGGTGGTAGCGATGAGAAAACTTCTAATTCAGAAGATACTGTTAAAGTACAATGCAGTCAGGAAGTTAGCAATGACTGTGCTATAAATGCTCTAAAGGAAGCATTTGTTGCTGTTGGTAATTCTCCTGGACCTGAAGGCCCATCATCATTTGCTGAAGTGGGTAATCCTGTCATGGCATTGGCATCTTTTCTTGCACACTTGGTGAGTTCTGATGTGGCTGTTGCTTCATCTCATAGTTTCTTAAAGTCAATGACTGGAAATTCTCCTGGCATGGAGCTTGCTGCAAGACATTGCTTTCTTCTGGAGGATCCACCATATAATAAGAAGGATTCCTCTAGTTCTGATAGGGATTATAAAAATGGAGAGCAGGAAGATGAGAATGTAAAACAGGATAAGCCAATATTAGACAATAAAGATTTACCAAATGATCACAATAACATGAAGATTGACAACAATGTTTTAGAAAACAACATACAGCTGGCTTCTACAGATGATGGAGCCTCAGAAAAACCCATTGCTTCAAAAGAGCAAGCAGTGATTAATCATGAAGCACTTGAACTTGACAAATGTAAAGATCTCATGCATTCGAAGTTGCCTGATAATCAAGCACCAAGCACTCTGCATGATTCAGGTGGTTCAACATCCAAGGATGAAATTCCACCTAGTGAGCTACGTGAGGGAACTTTGGCTAAAGAACCTTGCAATCCTGTAGAGGAAGTAAAGGATGGGCATGTGTCTGATTCTCTTCAATCAGGAAAGCATCTGCAGCCAGTAGAGATACCGAAAGATGCTGAGATGGCATCTGCTTCTATGCCCTCAGACAAGAACAGACCTCAAAAACCGCTATCTACAAATCCAGTTCATGAGTCTCTTGAAATGACAGGTTTAGAAATGGATGTTGATATGATTCCTTGTTCCTTGACATCAGAGATAAGTGACTCTCAACCACTATTAACAGCAGTTTCAATCCAAGTTAATGGGATAGAAAAGGATATAGATATGACGTCACCTTCACATCCAGTGAAACCTAATTCTGAGGCAGTGGCAGGTGAAGATCATGCAGAAAATTGCACAGTAGTGAAAGACAATAGTACGGAGACTAAACATGATAACAATTTTGAGAAACTAAAACATGCTGCAGTTTCTACACTTGCGGCAGCAGCAGTGAAGGCCAAAGTTCTAGCAAATCAGGAAGAAGACCAAATCCGACAACTTACTTCTTTGTTGATAGAAAAACAGTTGCATAAGTTGGAAGCCAAGCTGGCTTTTTTCAATGATGTGGAGAATGTAGTGATGAAAGCAAGGGATCATTTAGAGTGGTCACGGCATAAGCTTTACCATGAGCGTGCTCTCATAATTGCATCTCGGCTTGGTTTACCACCTTCCTCATCTAGAGGCGTACCACCATCTTTACCAACCAATAGAATTCCTGTGAATTTCGCAAACTCAATCCCAAGATCACAAAATATCACGAATCCCCAAATGCAGCTGATTTCAAGACCCGTGGGCGCTGTAGCGACTACTATTCCAAACCCATTACCATCTGCAACTGCAGCAGGAAATTCAGTTCGACCATCCAACCAGGAAAAACTTTCTTTAGTTAGGACAAAATAA 3096 0.4348 MEEKCRVAASHPPPAANSPVPEQSSTRRRAGGQKRKANALNASNSSSTPSKRATREKASQLHRSPLHNGPLTRARQIPTNLSAAAPADASSLAASGGSASATAIVKHTDHAAQKQGLGGDSVVVAEEIKKESKWESVEAAIEAEFEAIRSRGTNAHVVPTHCGWFSWTDIHPIENSTLPSFFNGKTENRTPDAYMMIRNCIIKKFHENPNIQVELKDLSELNGGDLNARQEVMEFLDYWGLINFHPFPAMGSAVANASDDGEAEVSSLLEKLYHIETPQLCPPVVQKPSLTTPAMTSGLFPESTIAGELVKQEGPAVEMLEYHCNSCAADCSCKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEAAGFSGGKWTDQETLLLLEALELYKENWNEIVEHVGTKSKAECILHFVQMPIVDAFIDSDDDVYATFKETADPTATNNYSSLQKDASEDAENNANDSIEGHDETSNAGNDKVKVNQESPKLEGGSDEKTSNSEDTVKVQCSQEVSNDCAINALKEAFVAVGNSPGPEGPSSFAEVGNPVMALASFLAHLVSSDVAVASSHSFLKSMTGNSPGMELAARHCFLLEDPPYNKKDSSSSDRDYKNGEQEDENVKQDKPILDNKDLPNDHNNMKIDNNVLENNIQLASTDDGASEKPIASKEQAVINHEALELDKCKDLMHSKLPDNQAPSTLHDSGGSTSKDEIPPSELREGTLAKEPCNPVEEVKDGHVSDSLQSGKHLQPVEIPKDAEMASASMPSDKNRPQKPLSTNPVHESLEMTGLEMDVDMIPCSLTSEISDSQPLLTAVSIQVNGIEKDIDMTSPSHPVKPNSEAVAGEDHAENCTVVKDNSTETKHDNNFEKLKHAAVSTLAAAAVKAKVLANQEEDQIRQLTSLLIEKQLHKLEAKLAFFNDVENVVMKARDHLEWSRHKLYHERALIIASRLGLPPSSSRGVPPSLPTNRIPVNFANSIPRSQNITNPQMQLISRPVGAVATTIPNPLPSATAAGNSVRPSNQEKLSLVRTK* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1784 1031 MobiDBLite consensus disorder prediction 598 643 - -
Lan8g1784 1031 CDD SANT 397 422 IPR001005 -
Lan8g1784 1031 Pfam SWIRM domain 159 244 IPR007526 GO:0005515
Lan8g1784 1031 ProSiteProfiles SANT domain profile. 380 427 IPR017884 -
Lan8g1784 1031 CDD ZZ_RSC8 322 366 IPR041984 -
Lan8g1784 1031 Pfam Myb-like DNA-binding domain 379 421 IPR001005 -
Lan8g1784 1031 Pfam Zinc finger, ZZ type 321 356 IPR000433 GO:0008270
Lan8g1784 1031 MobiDBLite consensus disorder prediction 1004 1031 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 461 480 - -
Lan8g1784 1031 PANTHER SWI/SNF COMPLEX-RELATED 44 989 - -
Lan8g1784 1031 Gene3D - 377 427 - -
Lan8g1784 1031 Pfam SWIRM-associated region 1 877 952 IPR032451 -
Lan8g1784 1031 Gene3D - 316 365 IPR043145 -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 766 780 - -
Lan8g1784 1031 Gene3D - 162 247 IPR036388 -
Lan8g1784 1031 SMART sant 377 425 IPR001005 -
Lan8g1784 1031 SMART zz_5 318 362 IPR000433 GO:0008270
Lan8g1784 1031 MobiDBLite consensus disorder prediction 689 780 - -
Lan8g1784 1031 ProSitePatterns Zinc finger ZZ-type signature. 324 350 IPR000433 GO:0008270
Lan8g1784 1031 SUPERFAMILY Homeodomain-like 163 245 IPR009057 -
Lan8g1784 1031 ProSiteProfiles Zinc finger ZZ-type profile. 319 373 IPR000433 GO:0008270
Lan8g1784 1031 MobiDBLite consensus disorder prediction 446 460 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 37 54 - -
Lan8g1784 1031 ProSiteProfiles SWIRM domain profile. 156 253 IPR007526 GO:0005515
Lan8g1784 1031 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 44 989 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 446 510 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 1 73 - -
Lan8g1784 1031 SUPERFAMILY RING/U-box 314 372 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 598 639 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 1003 1031 - -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 487 505 - -
Lan8g1784 1031 SUPERFAMILY Homeodomain-like 376 424 IPR009057 -
Lan8g1784 1031 ProSiteProfiles Myb-like domain profile. 379 423 IPR001005 -
Lan8g1784 1031 MobiDBLite consensus disorder prediction 693 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1784 Lan-Chr8 24443115 24449886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1784 322 419 EF-hand Containing Proteins AT3G07740 39.252 3.69e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1784 K11649 - gmx:100799723 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0159 7 966673 973757 Lan8g1784 8 24443115 24449886 LSH