Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0159 ATGGAGGAGAAACGCCGTGACGCCGCTCCTCGTTTTCCATCTCCCGCTGATTCCCCGTCATCAGAACCAACCCCCACGCGCCGCCGTGCCGGAGGTCATAAGAGGAAGGCCAACGCCTCCAATTCTTCTTCCACGCCTTCCAAACGCGCTACTCGTGAAAAGGCCTCTCTTCTTCACCCTCCTCCCCTCCACAACGGACCCCTCACTAGGGCTCGTCAAATCCCTACCAATCTCTCCGCCTCTGTCTCTGCCTCTGCCGCTGCCGCTGCTTCCTCTTCCGCGGCAAGTGGCGGCTCCGATTCTGCTCCGGCCCTGCCGAAACACTCGGAACATGTGGCGCAGAAACATTCTTCGGGCGGTGAGTCGGTGGTGCTGGCGGAGGAACAGAAGGAGGAGAGCGAGTTGGAGTCTGTGGAAGCTGCAATTGAAGCTGAAGTCGAAGCTATCAGATCTCGTGGAACCAATGCTCACGTTGTTCCCACTCATTGCGGTTGGTTTTCCTGGACTGATATTCACCCAATTGAGAAGCTCACATTGCCTTCTTTCTTTAATGGCAAAACTGAAAACCAGACACTTGACACATACATGGAGATACGGAATTGGATAATGAATACCTTTCATGCAAATCCAAACATTCAAGTTGAGTTGAAAGATTTGTCAGAGCTTAATGTTGGAGACTTGAATGCTAGGCAAAAGGTGATGGAGTTTCTGGACTATTGGGGTTTAATTAATTTCCACCCATTCCCTGCTTTGGGTTCCGCTGTTGCCAGTGCCAGTGATGATGGGGAAGCAGAAAATAATCCTTTGCTTCAAAAACTGTATCACTTTGAAACAGTCCAATTATGTCCACCTGTTGCTAAAAAACCTAGCCTAATGACTCCAGCTATGACCTCTGGCTTATTTCCAGAGTCTACAATTGCCGAAGAGTCGGTGAAACAGGAGGGGCCAGCAGTTGAGATGCTTGAGTACCATTGCAACTCTTGTGCTGGTGATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGCAGACTTCGATCTATGTACCGACTGCTTTAGTAATAGTAGATTTGGTGCTGGCATGTCTCCATTGGATTTTATACTCATGGAGCCAGCAGAAGCTGCAGGGGTTAGTGGAGGAAAGTGGACTGACCAGGAGACACTCCTACTCCTTGAAGCACTAGAACTTTATAAAGAAAATTGGAACGAAATTGCAGAACATGTTGGAACAAAATCAAAAGCTCAATGCATATTACATTTTGTTCAAATGCCAATTGAGGATGTCTTCATTGATTCTGACGATGCTGATGCCAGTTGCAAAGAAACAGCAGATCTGTCTGCAACTAACAAGGATCCATCATTACAAAAAGATTCTTCAGAAAATGCTGAGAGTAATGCTAATGACGGTATTGAAGACCTTGACAAAATTTCCAAGGCTGAAGATGATAAAGTAAAAATTAACCAGGAGACTCCAACGCTAGAAGATGGCAGTGATGAGAAAACTAGTGAGGAAACTTCTAAATCAGAAGATACTGTTAAAGTAAAACGTGTCCAGGAAGTTGGCAATGACTGTGCTCTAAATGCTCTAAAGGAAGCATTTGCTGATGTTGGTTATTCTCCTGGACCTGAATGCCCATCTTCATTTGCTGAAGTGGGTAATCCTGTCATGGCATTGGCATCCTTTCTTGCACACTTGGTGAGTTCTGATGTGGCTGTTGCTTCAGCTCATAGTTTTTTAAAATCAATGTCTGGGAACTCTCCTGGCACCGAGCTTGCTGCAAGGCATTGCTTTCTTCTGGAAGATCCACCATATAATAAGAAGGAAGCAGCTAGTTCTGAGAGGGATTCTAAAAAGGAGAGGGAGCAGGAAAGTGAGAATCTAAAAAAGGATAAACCAGCAGCAGACGATAAAGATTTACCAAATGATGACACTAACATGAAAATTGACAATAATGTTTTAGAAGACAACAGACAGCTGGCTTCTACAGATGATGGTGACTCAGAAAAACCATTTTCTTCAAAAGAGCAAGCAATGATTAATCATGAGACACTTGAACTTGACAAATGTAAAGATCTCAGCCATTCAAAGTTACCCAATAATCAAGCACCAAGCACTCTGCATGATTCAGGTGGTTCAACATCCAAGGATGAAATTTCACCTACTGAGGAGCTACATGAAGGAACTTTGGTTAAAGAACCTTGCAATCCTGTAGAGGAACTAAAAGATGGCCATGTGTCTGATTCTCTTCTGTCAGAAAAGCATCTACAGCCAGTGGAGACACCAAAAGATGCTGAGATGGCATCTGATTCTAAGCCCTCGGACAAGAGCATACCTCAAAAGCTGCAATCTACAAATGCAGTTCACGAGTCTCTTGAAACAGCGGATTCAGAAATGGATGTTGATATGGTTTGTCGTTCTTTGCCATTGGAGAAGAGTGATTCTCAACCTTTATCAACAGCAGTTTCATCCCAAGTTAATGGGATAGAAAAGGAGGTAGATATGATGTCACCTTCACATCCAGTTAGACCTAATTCTGAGACAGTGGCAGGTGAAGATCATGCAGAAAATGGCACAAAAGTGAAAGACAATAGTACAAAGACCAAACCTTATAACAATTTTGAGAAACTAAAACATGCTGCAGTTTCTACACTTGCTGCAGCAGCAGTGAAGGCAAAAGTTCTAGCAAATGAGGAAGATGACCAAATCCGACAACTTACTTCTTTGTTGATAGAAAGACAGTTGCATAAGTTAGAAGCAAAGCTGGCTTTTTTCAATGATGTGGAGAATGTGGTGATGAGGGCAAGGGACCATTTAGAGCGGTCACGGCAAAAGCTTTATCATGAACGTGCTCTCATAATTGCATCCCGGCTTGGTTTACCACCTTCCTCATCTAGAGGTGTACCACCATCCTTACCAACCAATAGAATTCCTGTGAATTTTGCAAACTCAATCCCAAGATCACAAAACATCATAAATCCCCAAATGCTGCCGACTTCAAGACCTGTGGGCACTGTAGCCACTACTATTCCAAGCCCATTAGCATCTGCAACTTCAGCAGGAAGTTCAGTTCGTCCACCGAGCAAGGAAAAACTTTCTTTTGTTGGGACAAAGTAA 3114 0.4419 MEEKRRDAAPRFPSPADSPSSEPTPTRRRAGGHKRKANASNSSSTPSKRATREKASLLHPPPLHNGPLTRARQIPTNLSASVSASAAAAASSSAASGGSDSAPALPKHSEHVAQKHSSGGESVVLAEEQKEESELESVEAAIEAEVEAIRSRGTNAHVVPTHCGWFSWTDIHPIEKLTLPSFFNGKTENQTLDTYMEIRNWIMNTFHANPNIQVELKDLSELNVGDLNARQKVMEFLDYWGLINFHPFPALGSAVASASDDGEAENNPLLQKLYHFETVQLCPPVAKKPSLMTPAMTSGLFPESTIAEESVKQEGPAVEMLEYHCNSCAGDCSRKRYHCQKQADFDLCTDCFSNSRFGAGMSPLDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVGTKSKAQCILHFVQMPIEDVFIDSDDADASCKETADLSATNKDPSLQKDSSENAESNANDGIEDLDKISKAEDDKVKINQETPTLEDGSDEKTSEETSKSEDTVKVKRVQEVGNDCALNALKEAFADVGYSPGPECPSSFAEVGNPVMALASFLAHLVSSDVAVASAHSFLKSMSGNSPGTELAARHCFLLEDPPYNKKEAASSERDSKKEREQESENLKKDKPAADDKDLPNDDTNMKIDNNVLEDNRQLASTDDGDSEKPFSSKEQAMINHETLELDKCKDLSHSKLPNNQAPSTLHDSGGSTSKDEISPTEELHEGTLVKEPCNPVEELKDGHVSDSLLSEKHLQPVETPKDAEMASDSKPSDKSIPQKLQSTNAVHESLETADSEMDVDMVCRSLPLEKSDSQPLSTAVSSQVNGIEKEVDMMSPSHPVRPNSETVAGEDHAENGTKVKDNSTKTKPYNNFEKLKHAAVSTLAAAAVKAKVLANEEDDQIRQLTSLLIERQLHKLEAKLAFFNDVENVVMRARDHLERSRQKLYHERALIIASRLGLPPSSSRGVPPSLPTNRIPVNFANSIPRSQNIINPQMLPTSRPVGTVATTIPSPLASATSAGSSVRPPSKEKLSFVGTK* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0159 1037 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 374 416 IPR017930 -
Lan7g0159 1037 ProSiteProfiles Zinc finger ZZ-type profile. 320 374 IPR000433 GO:0008270
Lan7g0159 1037 MobiDBLite consensus disorder prediction 836 869 - -
Lan7g0159 1037 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 41 996 - -
Lan7g0159 1037 SUPERFAMILY RING/U-box 317 360 - -
Lan7g0159 1037 Gene3D - 377 428 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 756 770 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 772 791 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 468 513 - -
Lan7g0159 1037 Pfam SWIRM-associated region 1 883 958 IPR032451 -
Lan7g0159 1037 ProSiteProfiles SWIRM domain profile. 157 254 IPR007526 GO:0005515
Lan7g0159 1037 ProSiteProfiles Myb-like domain profile. 374 424 IPR001005 -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 36 51 - -
Lan7g0159 1037 CDD ZZ_RSC8 323 367 IPR041984 -
Lan7g0159 1037 PANTHER SWI/SNF COMPLEX-RELATED 41 996 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 443 466 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 695 717 - -
Lan7g0159 1037 Pfam SWIRM domain 160 245 IPR007526 GO:0005515
Lan7g0159 1037 SMART zz_5 319 363 IPR000433 GO:0008270
Lan7g0159 1037 Coils Coil 125 148 - -
Lan7g0159 1037 Pfam Myb-like DNA-binding domain 380 422 IPR001005 -
Lan7g0159 1037 SUPERFAMILY Homeodomain-like 164 246 IPR009057 -
Lan7g0159 1037 SUPERFAMILY Homeodomain-like 377 431 IPR009057 -
Lan7g0159 1037 Pfam Zinc finger, ZZ type 322 358 IPR000433 GO:0008270
Lan7g0159 1037 MobiDBLite consensus disorder prediction 603 799 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 680 694 - -
Lan7g0159 1037 ProSiteProfiles SANT domain profile. 377 428 IPR017884 -
Lan7g0159 1037 SMART sant 378 426 IPR001005 -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 1 74 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 93 135 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 603 650 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 735 749 - -
Lan7g0159 1037 ProSitePatterns Zinc finger ZZ-type signature. 325 351 IPR000433 GO:0008270
Lan7g0159 1037 Gene3D - 317 365 IPR043145 -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 846 862 - -
Lan7g0159 1037 CDD SANT 398 423 IPR001005 -
Lan7g0159 1037 Gene3D - 163 248 IPR036388 -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 443 513 - -
Lan7g0159 1037 MobiDBLite consensus disorder prediction 1013 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0159 Lan-Chr7 966673 973757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0159 323 420 EF-hand Containing Proteins AT3G07740 36.364 7.24e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0159 K11649 - gmx:100786881 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0159 7 966673 973757 Lan8g1784 8 24443115 24449886 LSH