Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1773 ATGGCAGTAAACGATGCTGATCAATCGAACAAGTCACACAGGACGCGTCAATCTGGCGCCAAAAAGGACAAGAAGAAGCTGAAGAAGAAGAAGCAATACGATTTTGAAGATGAACAGAAACAGCAACAGAACCCTAAGGCATTCGCTTTTTCTTCCTCCAATAAAGCTAAGAAGTTGCAATCACGCGCCGTCGAGAAAGAGCAACGCCGTCTTCACGTTCCAATCATTGACCGTTCTTATGGGGAACCTGCTCCGTTCGTCGTCGTTGTGCAGGGTCCACCCCAGGTTGGGAAGTCACTGTTGATAAAGTCTCTGATTAAACATTATACGAAACAAAATTTACCTGAAGTTCGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGACGACTGCAATTTGTGGAATGTCCAAATGATGTCAATGGCATGATAGATGCAGCAAAGTTTGCTGATTTAGCACTGCTTCTTGTAGATGGGAGTTATGGTTTCGAAATGGAAACCTTTGAATTCCTCAACATTTTGCAAGTTCATGGGTTCCCAAAGGTGATGGGGGTTCTTACTCATCTTGATCAGTTCAGGGATGCTAAAAAGTTGAGGAAAACAAAACAGCGCCTTAAACACCGGTTTTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCAGGCCTTATTAATGGAAAGTACGTCAAGCGTGAAGTCCACAATCTTGCCCGATTCATTTCTGTGATGAAGTTTCAGCCTTTATCTTGGCGAACTTCCCACCCATATGTTTTGGTAGATCGTTTTGAAGATATCACTCCTCCCGAAAAAGTGCATGAAAATAAGAAATGTGACAGAAAAGTCACACTTTATGGCTATCTTAGAGGGTGTAATCTGAAAAAGGGGCATAAGGTGCACATTGCTGGAGTGGGTGATTATAGTTTACCTGGTATTACTGCTTTACCAGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTTCGTGATAAGGAGAAGTTATTCCATGCTCCAATGTCTGGCCTTGGGGATCTTATGTATGACAAAGATGCTGTATACATAAATATCCATGACCACCTTGTTCAATTTTCAAAAGTTGATGATGAAAACTCAGCCATGATGAGCAAAGGAAAGGACAGAGATGTGGGGGAAGTTTTGGTGAAATCACTACAGAATACCAAATACTCAATTAATGAAAAGTTAGAGAACAGCAGTATCAATCTCTTTGGTCAAAAGCCAAAAGTGTCATCAGAAGCTCTAGCTGATACACGGGATGATATAGCTGGTAAAGATAGTGAAGATAATAATGAAATGGATTCAGATGGTTCAGAATCATCTGATCAGGATGAAGCTGATGCCATGACAGATAGGGAAGCGTCTGGTTCTGATGATGAAGATGGTGATGCATCTGATAGTAAAGTTACTCCTGGAGACCACTTAAAAGAGCATATTGAGTTTATTGATGGAAGACGAAGAAGGGGAGTGATCTTTGGAAGTGGTGTTAATCAAAATGATCTGTCGGATTTAGAAGAAGAGAATGGTGCTGCCAGTGACGATGTAGCATCTTCTGAGTCAGAATCTTCAAAAGAGGAGGAGGATGACGACAATAGTGATGATGGCCCAGATGATGATGACATGGGAAATGTTTCAAAGTGGAAAGAGTCTTTGGCAGAAAGAACTCTATCACGGAAATCTCCTAGTTTGACGCAACTTGTCTATGGGGAATCTACTGTTAATCCGACCTCTATAAACAATGAAAATGATAATAGTGAGGATGATGGAAGTGAAGATGACTTTTTTAAGCCTATAGAAGAAGTTAAAAAGCAGAGCATGACAGACGGGTTTAACGATGGAACGGCCAACATTGAGGATTGTTCCATGCTTGCACATTTTGTGCATCAGAAATGGGATGATAAAGATAATGAGGGTATTCGCAATCGTTTTGTGACTGGAAATTTGGCAAAAGCTGCACTCCGTAATCCACTACCAAAAACTAAGACTGAAGAGGAGAATGATGATTTGTATGGTGATTTTGAAGATTTAGAAACTGGAGAAAAATACGAGAATCATCAGACGGATGATGCTTTTGTTGCAACAATACCCAAGGGAGATGATTTGGAAGCTGAACAGCGGCGGCTTAAGAAACTTGCTCTTCGTGCGAAATTTGATTCTCAATATGGTGATGACTCTGGGTCAGCTGAGGAAGATACTGGTAATGAAAATGAGGTCAAATTCCATCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAGGAAGAGATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGAACTTGATGAAACTGCCAGAATAGAGACAGAAGGCTTCCGTACTGGGACATATCTAAGATTGGAGATTCATGATGTTCCTTTTGAGATGGTTGAATACTTTGACCCCTACCATCCAATATTGGTGGGAGGGGTTGGTCTTGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGATGGCACAAGAAAGTGCTAAAGACTAGAGATCCAATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGACATCAATGGAAGGCATCGAATGCTAAAATATACTCCAGAGCACATGCATTGTCTCGCTATGTTTTGGGGCCCACTTGCCCCTCCCAACACTGGGATAGTTGCTGTTCAGAATCTATCGAAAAATCAGGCAACATTTAGGATCACTGCAACTGCTGTTGTTGTTGAGTTTAAACACGAAGCAAGAATAGTGAAGAAAATCAAATTGGTTGGTTACCCGTGCAAGATATTCAAGAAAACAGCACTTATAAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCATCTATTCGAACAGTCAGTGAGATCAGGGGGCAGGTCAAGAAGGTTGCAAAAGAAGAGATAGGTAACCAACCAAAAAGGAAGGGTGGACAAACCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGATATTGTTTTCCTGCGTGCATGGACACAAGTTGAAGTTCCCCAGTTCTACAATCCATTGACAACTGCATTGCAGCCTCGTGACAAGACTTGGCAAGGAATGAAAACTGTTGCAGAATTGAGAAGAGAAAACAATCTTTCAATACCTGTAAACAAAGATTCACTTTACAAGAAAATTGAAAGAAAACAAAGGAAGTTCAATCCAGTGGTGATTCCCAAGTCTCTACAGGCAAGCCTTCCCTTTGAATCAAAACCCAAGGATATTCCCAAGCGGAAGAGGCCATTACTTGAAGAAAGAAGGAAAAGGGGTGTTGTGATGGATCCTCGTGAGCGCAAAGTTCATGCTCTTGTTCAACAATACCAGTTAATTAGACATGATAAGATGAAAAAGCGAAAGGTTAATGAAGATAAAAAGAGGAAGGTACTTGAAGCGGAGAGAGCAAAAGAGGAGGAGTTGTCAAAAAAGCGCCGAAGAGAGGAAAGGCGAGTGAAATACCGGGCGCAAGACAAGCAAAATAAGAAAATTCGTAGAGCATAG 3588 0.4105 MAVNDADQSNKSHRTRQSGAKKDKKKLKKKKQYDFEDEQKQQQNPKAFAFSSSNKAKKLQSRAVEKEQRRLHVPIIDRSYGEPAPFVVVVQGPPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDVNGMIDAAKFADLALLLVDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDQFRDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLINGKYVKREVHNLARFISVMKFQPLSWRTSHPYVLVDRFEDITPPEKVHENKKCDRKVTLYGYLRGCNLKKGHKVHIAGVGDYSLPGITALPDPCPLPSAAKKKGLRDKEKLFHAPMSGLGDLMYDKDAVYINIHDHLVQFSKVDDENSAMMSKGKDRDVGEVLVKSLQNTKYSINEKLENSSINLFGQKPKVSSEALADTRDDIAGKDSEDNNEMDSDGSESSDQDEADAMTDREASGSDDEDGDASDSKVTPGDHLKEHIEFIDGRRRRGVIFGSGVNQNDLSDLEEENGAASDDVASSESESSKEEEDDDNSDDGPDDDDMGNVSKWKESLAERTLSRKSPSLTQLVYGESTVNPTSINNENDNSEDDGSEDDFFKPIEEVKKQSMTDGFNDGTANIEDCSMLAHFVHQKWDDKDNEGIRNRFVTGNLAKAALRNPLPKTKTEEENDDLYGDFEDLETGEKYENHQTDDAFVATIPKGDDLEAEQRRLKKLALRAKFDSQYGDDSGSAEEDTGNENEVKFHRGQANESSYFDKLKEEIELRKQMNIAELNELDETARIETEGFRTGTYLRLEIHDVPFEMVEYFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDINGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSKNQATFRITATAVVVEFKHEARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGASIRTVSEIRGQVKKVAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDKTWQGMKTVAELRRENNLSIPVNKDSLYKKIERKQRKFNPVVIPKSLQASLPFESKPKDIPKRKRPLLEERRKRGVVMDPRERKVHALVQQYQLIRHDKMKKRKVNEDKKRKVLEAERAKEEELSKKRRREERRVKYRAQDKQNKKIRRA* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1773 1195 SMART DUF663_2 702 1028 IPR007034 -
Lan8g1773 1195 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 708 1029 IPR007034 -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 421 439 - -
Lan8g1773 1195 Coils Coil 1142 1179 - -
Lan8g1773 1195 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 248 IPR030387 -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 418 607 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 1153 1184 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 528 546 - -
Lan8g1773 1195 Coils Coil 509 529 - -
Lan8g1773 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 225 IPR027417 -
Lan8g1773 1195 PANTHER BNAC08G44910D PROTEIN 1 1187 - -
Lan8g1773 1195 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 1187 IPR039761 GO:0042254
Lan8g1773 1195 Gene3D - 86 249 IPR027417 -
Lan8g1773 1195 CDD BMS1 47 277 IPR037875 GO:0005525
Lan8g1773 1195 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Lan8g1773 1195 MobiDBLite consensus disorder prediction 728 750 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 1 54 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 453 495 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 564 591 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 547 563 - -
Lan8g1773 1195 MobiDBLite consensus disorder prediction 1144 1195 - -
Lan8g1773 1195 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1773 Lan-Chr8 24372766 24380693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1773 K14569 - gmx:100810906 1826.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1773 8 24372766 24380693 Lan13g0271 13 1716989 1724907 LSH