Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1760 ATGGCACGCAACAATGGCCTTTTCATTCTTGGTTTTGTTGCTTTTGTTCTTGCAATGAGCATTTCTAAAGTGACTTGCACCGAAGCTGTTGTTGGAATTGACCCAATTATTGATGTTGCTTCTCTAAATCGGCAAAGTTTCCCTCCTGGCTTCATCTTTGGAGCGGGTTCCTCATCATACCAGTTCGAAGGTGCTGCAAATGAAGGTGGTAGAGGACCAAGTGTATGGGATACCTTCACTCATGAATATCCAGATAAGATAAAAGATAGAAGCAATGGAGATGTAGCCATTGATGAATATCACAAGTACAAGGAGGATGTTGCAATTATGAAGGACATGAACTTGGATTCATACAGATTCTCAATATCTTGGTCTAGAATACTTCCAAATGGAAAAGTGAGTGGGGGCATAAATCAAGAAGGAGTCAACTATTACAACAACCTCATCAACGAGCTATTGGCAAATGGTATTCAACCACTTGTGACTCTTTTCCACTGGGATCTTCCACAATCCTTAGAAGATGAATATGGTGGCTTCTTAAGCCCCCTCATTGTTAAAGATTTTAAGGATTATGCGGAACTTTGCTTCAAGGAATTCGGTGATAGAGTGAAGTTTTGGGTTACTTTGAATGAGCCATGGAGTTATAGCAGTAATGGGTATACAAATGGAAGAATGGCACCAGGTCGTTGTTCTTCTTGGGTGAACCCAAATTGCACTGGTGGTGATTCTTCCATAGAGCCCTATATAGTTACACACTACCAACTTCTTGCTCATTCAGCAGCTGTTCGTGTGTACAAGACTAAGTTTCAGGAATCTCAAAAAGGTTCAATAGGCATAACCTTGGTAGCTAATTGGTATCTGCCACTTGCAGATACCAAATTAGATCAAAAGGCTGCTGAAAGAGCAATTGACTTCATGTATGGATGGTATATGGATCCACTAACATTTGGAGACTATCCAAAAAGCATGCGATCCCTAGTGAGAACACGTTTGCCAAAGTTCACAGCAGAAGAAAGCAAGCAACTGAAGGGTTCTTTTGATTTTATTGGTCTAAACTATTATTCCTCAACCTATGCCTCAGATGCACCTTTTCTAAGCAATGCTAGACCTAGCTATGCAACCGATGCTTTATTTGATCCTGCATTTGAGCGCAATGGGAAACCCATTGGTATAAAGGTTGCTTCAGATTGGTTATACGTTTATCCAAGAGGAATTAGAGACCTTTTGGTATACACTAAGGAGAAGTACAATAACCCCTTAATTTACATTACTGAAAATGGTATAAATGAATTTAATGATCAAACATTATCGGTGGAAGAAGCACTTATGGATACTTTTAGAATTGATTATCATTTTCGTCATTTGTTTTATCTTCGATCCGCAATTAGGAGTGGAGTAAATGTAAAGGGATATTATGTCTGGTCTTTGTTCGACAATTTTGAATGGTTCTCGGGTTACACAGTTCGATTTGGAATGACCTTCGTGGATTACAAAAATGACATGAAACGATACAAAAAATTATCTGCATTATGGTACAAGAAGTTTCTGCAGAAAGAAACTAGACTTTATGGTTCTAGTAAATAA 1584 0.387 MARNNGLFILGFVAFVLAMSISKVTCTEAVVGIDPIIDVASLNRQSFPPGFIFGAGSSSYQFEGAANEGGRGPSVWDTFTHEYPDKIKDRSNGDVAIDEYHKYKEDVAIMKDMNLDSYRFSISWSRILPNGKVSGGINQEGVNYYNNLINELLANGIQPLVTLFHWDLPQSLEDEYGGFLSPLIVKDFKDYAELCFKEFGDRVKFWVTLNEPWSYSSNGYTNGRMAPGRCSSWVNPNCTGGDSSIEPYIVTHYQLLAHSAAVRVYKTKFQESQKGSIGITLVANWYLPLADTKLDQKAAERAIDFMYGWYMDPLTFGDYPKSMRSLVRTRLPKFTAEESKQLKGSFDFIGLNYYSSTYASDAPFLSNARPSYATDALFDPAFERNGKPIGIKVASDWLYVYPRGIRDLLVYTKEKYNNPLIYITENGINEFNDQTLSVEEALMDTFRIDYHFRHLFYLRSAIRSGVNVKGYYVWSLFDNFEWFSGYTVRFGMTFVDYKNDMKRYKKLSALWYKKFLQKETRLYGSSK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1760 527 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 51 65 IPR033132 -
Lan8g1760 527 SUPERFAMILY (Trans)glycosidases 36 517 IPR017853 -
Lan8g1760 527 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 4 523 - -
Lan8g1760 527 PANTHER GLYCOSYL HYDROLASE 4 523 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 PRINTS Glycosyl hydrolase family 1 signature 345 359 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 PRINTS Glycosyl hydrolase family 1 signature 421 429 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 PRINTS Glycosyl hydrolase family 1 signature 444 455 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 PRINTS Glycosyl hydrolase family 1 signature 465 482 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 PRINTS Glycosyl hydrolase family 1 signature 489 501 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 Gene3D Glycosidases 33 518 - -
Lan8g1760 527 Pfam Glycosyl hydrolase family 1 44 519 IPR001360 GO:0004553|GO:0005975
Lan8g1760 527 ProSitePatterns Glycosyl hydrolases family 1 active site. 421 429 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1760 Lan-Chr8 24256345 24259398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1760 42 521 Glycoside Hydrolase AT5G44640 55.301 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1760 - K01188 gmx:100776708 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0323 10 2150070 2155621 Lan8g1760 8 24256345 24259398 PCT