Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0323 ATGGAGTTTAAAGCGTTTTTACTTGTTGGCCTATTTGCTCTTGTTACAATATCTGCATCAGTTAGTTTTGCAGAAGAAGTTGTTGCACCCATTCTTGATGTTTCTTCTCTCAATCGGACCAGTTTTCCTAAAGGATTTATTTTTGGGACAGCATCTGCGGCGTACCAGTATGAAGGCGCTGCAAAAGAAGGTGGTAGAGGACCAAGTATATGGGATACCTTCACTCATAAATATCCAGAAAGGATACAAGATAGAAGCAATGGAGATGTTGCTAATGATCAATATCACCACTATAAGGAAGATGTTGGGATCATGAAGCATATGAATTTGGATGCTTATAGATTATCCATTTCTTGGTCTAGAATACTCCCAATTGGAAAGCTAAGTGGAGGTATAAACAAAGAAGGGGTCAATTATTACAACAATCTCATCAACGAGCTACTAGCTAATGGAATACAACCATTTGTGACCCTTTTTCATTGGGATCTTCCCCAAACCTTGGAAGAGGAGTATGGTGGCTTCCTAAGCCCGGACATTGTAAAACATTTTGGAGAATATGTAGATGTTTGCTTCAAGGAATTTGGAGATAGGGTGAAACATTGGATTACTTTGAATGAGCCATTCACTTATAGTTTTGCTGGTTATGCACTAGGACAATTTGTACCAGCTAGATGTTCAAAATGGGTAAATCCAAATTGCATTGGAGGTGATTCAGGGACAGAACCCTATGTGGTTGCACATCACCTCCTTCTTGCTCATGCAGCAGCTGTTCAAATATACAAGAACAAGTATCAGGCGTCTCAAAAGGGTGTAATAGGCATAACCTTGGTGTCTAGTTGGTTTGAGCCACGTTCAAATAGCAACGAAGATAAAGAAGCTGCCAAACGAGCAATTGACTTCATGTTTGGATGGTTTATGGCACCATTGGCAACAGGAGATTATCCAAAAAGTATGCGATCCTTAGTGGGAAATCGATTACCAAAGTTTAATACACAACAAGCTACAGAAGTCAATGGTTCATTTGATTTTATTGGTCTAAATTACTACACAGCCAAGTATGCTTCTCCTGCACCTAAGTTAAATGATGGGAAACTTAATTATATCACAGATTCTCTTGCCAATCTTACAGATGAGCGCAACGGGATTCCCATAGGCCCAAGGGCTGCTTCAGATTGGTTATATGTTTATCCAAAAGGAATTAAAGAAGTATTGCTCCACATTAAAAATGATTATAACAATCCTTTGATCTACATCACTGAAAATGGTATGGATGAGTATGATGATCCAACACTATCACTTAAGGAAGCTCTCATGGATACATTTAGAATTGACTATCATTATCGTCATCTCTTTTATCTTCAATCGGCAATTTGTGATGGCGCAAATGTAAAGGGATATTTTGCATGGTCATTGTTGGACAATTTTGAATGGTCTTCAGGCTACACATTACGATTTGGAATAAACTATGTAGATTATAAAAGTGGTAAGAGATACCAAAAGCTTTCAGCAGAATGGTTCAAGAATTTTCTCAAAAAATATTAA 1542 0.3794 MEFKAFLLVGLFALVTISASVSFAEEVVAPILDVSSLNRTSFPKGFIFGTASAAYQYEGAAKEGGRGPSIWDTFTHKYPERIQDRSNGDVANDQYHHYKEDVGIMKHMNLDAYRLSISWSRILPIGKLSGGINKEGVNYYNNLINELLANGIQPFVTLFHWDLPQTLEEEYGGFLSPDIVKHFGEYVDVCFKEFGDRVKHWITLNEPFTYSFAGYALGQFVPARCSKWVNPNCIGGDSGTEPYVVAHHLLLAHAAAVQIYKNKYQASQKGVIGITLVSSWFEPRSNSNEDKEAAKRAIDFMFGWFMAPLATGDYPKSMRSLVGNRLPKFNTQQATEVNGSFDFIGLNYYTAKYASPAPKLNDGKLNYITDSLANLTDERNGIPIGPRAASDWLYVYPKGIKEVLLHIKNDYNNPLIYITENGMDEYDDPTLSLKEALMDTFRIDYHYRHLFYLQSAICDGANVKGYFAWSLLDNFEWSSGYTLRFGINYVDYKSGKRYQKLSAEWFKNFLKKY* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0323 513 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 46 60 IPR033132 -
Lan10g0323 513 Pfam Glycosyl hydrolase family 1 40 512 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 Gene3D Glycosidases 22 512 - -
Lan10g0323 513 PRINTS Glycosyl hydrolase family 1 signature 340 354 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PRINTS Glycosyl hydrolase family 1 signature 416 424 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PRINTS Glycosyl hydrolase family 1 signature 439 450 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PRINTS Glycosyl hydrolase family 1 signature 460 477 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PRINTS Glycosyl hydrolase family 1 signature 484 496 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PANTHER GLYCOSYL HYDROLASE 2 512 IPR001360 GO:0004553|GO:0005975
Lan10g0323 513 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 2 512 - -
Lan10g0323 513 SUPERFAMILY (Trans)glycosidases 29 511 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0323 Lan-Chr10 2150070 2155621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0323 1 512 Glycoside Hydrolase AT5G44640 53.891 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0323 - K01188 gmx:100811884 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0323 10 2150070 2155621 Lan8g1760 8 24256345 24259398 PCT