Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1699 ATGGAGTTTCTAACTCTAGTTTATGTAGTTTCAGCACTGTACTTGTGTTCCCTGGTCTGGAAGTTTTTTGTTCAGAGGAGGGACCAAGAGTGTTACATATTAGACTACCAATGTTACAAGCCAACTAATGACAGAATGCTTGGAACTGAGTTTTGTGGTAAGATCATCAAAAGAAATGAAAACTTGGGTCTCAATGAGTACAAGTTTCTCCTCAAAGCTATTGTTAGTTCTGGCATAGGGGAGGAAACTTATGCTCCAAGAAACATCTTTGATGGCCGTGAAGCAAACCCAACTTTGATGGATAGCATAACAGAAATGGAGGAGTTCTTCAATGAAACCATTGCAAAACTTCTAGCCAGGTCAGAAATTTCACCTTCTGAGATTGATGTCCTTGTGGTTAATATCTCTATGCTTGCTGCTGTTCCTTCCTTATCTTCAAGAATCATTAACCGTTACAAATTGAGACATGATGTTAAGGTTTACAACCTCACTGGGATGGGTTGTAGTGCTAGCTTAATTTCTTTGGACATTATTAAGAACATTTTTATGTCACAAAGGAACAAGTATGCACTTTTGGTCACTTCTGAGTCCTTAAGTCCAAATTGGTATTCTGGCAATGATAGATCAATGATCCTTGCCAATTGTTTGTTCCGGTCCGGTGGTTGTGTCATTCTTCTCACAAACAAAAGTTCCTTAAAGCATAAAGCCATGTTTAGATTGAAGTGTTTGGTGAGAACACATCATGGTGCTAGAGATGAGGCATATAATTGTTGTGTTCAAAAAGAAGATGACCAAGGTAGGCTTGGTTTTCATCTTGGGAAAACTCTCCCTAAGGCAGCTACAAGAGCCTTTATTGACAATTTAAGGGTACTATCTCCCAAGATTTTACCAGCTAGAGAGTTGCTTAGGTTTCTTATCATGTCCCTAATTAAAAATGTAATGAAAAGTAACACCCCAAAGTCTTCAAGTGGTGGAGGTAGTAATATTAATACTACTAAATCCCCTTTGAACTTCAAGACTGGGGTTCATCATTTTTGCCTCCATACAGGAGGAAAAGCAGTGATTGATGGAATTGGAATGAGCCTAGATCTGTGTGAATATGATCTTGAACCAGCTAGAATGACACTACACCGTTTTGGGAATACATCTGCAAGTAGCCTATGGTATGTTCTAGGGTACATGGAGGCCAAGAAGAGGCTCAAAAAAGGTGATAAAGTATTGATGATAAGTTTTGGTGCTGGCTTTAAATGCAACAGCTGTATGTGGGAGGTAATGAAGGATCTTGGGGATTCTAATGTGTGGGGTGATTGCATTCATGACTATCCACCACTGTGTTTGACCAATCCTTTCATGGAGAAGTATAGTTGGATCAATGAAGTTGAGGATCCAAACTCATATGAACTTCCAGATTTTCTTAAGTAG 1422 0.3903 MEFLTLVYVVSALYLCSLVWKFFVQRRDQECYILDYQCYKPTNDRMLGTEFCGKIIKRNENLGLNEYKFLLKAIVSSGIGEETYAPRNIFDGREANPTLMDSITEMEEFFNETIAKLLARSEISPSEIDVLVVNISMLAAVPSLSSRIINRYKLRHDVKVYNLTGMGCSASLISLDIIKNIFMSQRNKYALLVTSESLSPNWYSGNDRSMILANCLFRSGGCVILLTNKSSLKHKAMFRLKCLVRTHHGARDEAYNCCVQKEDDQGRLGFHLGKTLPKAATRAFIDNLRVLSPKILPARELLRFLIMSLIKNVMKSNTPKSSSGGGSNINTTKSPLNFKTGVHHFCLHTGGKAVIDGIGMSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDKVLMISFGAGFKCNSCMWEVMKDLGDSNVWGDCIHDYPPLCLTNPFMEKYSWINEVEDPNSYELPDFLK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1699 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 456 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan8g1699 473 Pfam FAE1/Type III polyketide synthase-like protein 24 311 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan8g1699 473 Gene3D - 68 424 IPR016039 GO:0016746
Lan8g1699 473 SUPERFAMILY Thiolase-like 243 425 IPR016039 GO:0016746
Lan8g1699 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan8g1699 473 CDD CHS_like 12 422 - -
Lan8g1699 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 342 423 IPR013747 -
Lan8g1699 473 PANTHER 3-KETOACYL-COA SYNTHASE 1 463 - -
Lan8g1699 473 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1699 Lan-Chr8 23871755 23873653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1699 19 470 Acyl Lipid Metabolism Gene Families AT2G28630 68.640 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1699 K15397 - gmx:100810048 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0064 3 433271 434992 Lan8g1699 8 23871755 23873653 PCT
Lan8g1699 8 23871755 23873653 Lan3g0064 3 433271 434992 PCT