Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0064 ATGGAATTCCTCTCTATACTTTATGTTGTTATAGTGTTGTACTTGTGTTACATGGTGTGGAAGTTGTTTGATCAGAAAAGGGACCAAGAGTGTTACATATTGGCCTACCAATGCTACAAGCCAAGTGATGATAGAATGCTTGGAACAGATTGTTGTGGAAAGATCATGGAAAGGAACAAGAACTTAGGTCTTAATGAGTACAAGTTCCTCCTCAAAGCTGTTGTGAGTTCAGGAGTTGGTGAGAAAACTTATGCTCCAAGAAACATCGTCGAAGGCCGCGAGTTGAATCCGACATTGAATGATGGTATCATAGAGATGGAGGAGTTTTTCAATGACAACATTGCAAAGCTCCTTGCAAAAACAGGCATTTCTCCTTCACAAATTGATGTACTTGTGGTAAATGTCTCAATGATTTCTTCTCATCCTTCTTTAGCTTCTAGAATCATTAACCATTACAAAATGAGGCAAGATATTAAAGCTTTCAACCTCACAGGGATGGGTTGTAGTGCTAGCCTTATTTCTTTGGACATTATTAAGAACATTTTCATATCACAAAAGAACAAGTTTGCACTTTTGGTCACTTCTGAGTCTCTTAGTCCAAATTGGTATTCTGGCAATGACAAATCAATGATCCTTACCAATTGTTTGTTTAGGGCTGGTGGCTGTGCCATGCTTCTCACAAATAAAAGATCCTTAAAGCACAAAGCAATCTTGAGATTGAAATGCTTAGTAAGAACTCATCATGGGGCTATAGAAGATGCTTATAATTGTTGTAATCAAAAGGAAGATAACCAAGGTAAACTTGGATTCTACCTCTCTAAAAATCTCCCAAAGGCAGCTACAAAAGCTTTTGTAGATAACTTAAAGGTACTATGCCCTAAGGTTTTGCCAACTAGGGAGTTTTTAAGGTACATGATTGTGTCTCTAATGAAAAAGCGTAATAGAAATAGTTCCCCTAAGATCATTGCAACCCTAAATAAGTCTCCATTGGACTTCAAGAGTGGAGTTGAACATTTTTGCCTCCACACAGGAGGAAAAGCAGTGATTGAGGGCATTGGAAAAAGCTTAGATCTTTGTGACTATGATCTTGAGCCATCAAGGATGACCCTACACCGGTTTGGTAACACATCAGCTAGTAGCCTTTGGTATGTGCTAGGGTATATGGAAGCAAAGAAGAGGCTCAAGAAAGGTGATAGAGTAATGATGATAAGTTTTGGTGCTGGTTTCAAATGTAATAGTTGTTTATGGGAAGTAATGAAGGATTTGGTTGATAGAAATGTGTGGGATGATTGTGTTGATGAGTACCCACCAGAGTCTTTGGCTAACCCTTTCATGGAGAGATTTGGTTGGATCAATAATGTTCAGGATCCAAACACTTTCATACTTTCAGATTTTCTCAAGTAA 1404 0.3825 MEFLSILYVVIVLYLCYMVWKLFDQKRDQECYILAYQCYKPSDDRMLGTDCCGKIMERNKNLGLNEYKFLLKAVVSSGVGEKTYAPRNIVEGRELNPTLNDGIIEMEEFFNDNIAKLLAKTGISPSQIDVLVVNVSMISSHPSLASRIINHYKMRQDIKAFNLTGMGCSASLISLDIIKNIFISQKNKFALLVTSESLSPNWYSGNDKSMILTNCLFRAGGCAMLLTNKRSLKHKAILRLKCLVRTHHGAIEDAYNCCNQKEDNQGKLGFYLSKNLPKAATKAFVDNLKVLCPKVLPTREFLRYMIVSLMKKRNRNSSPKIIATLNKSPLDFKSGVEHFCLHTGGKAVIEGIGKSLDLCDYDLEPSRMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVMMISFGAGFKCNSCLWEVMKDLVDRNVWDDCVDEYPPESLANPFMERFGWINNVQDPNTFILSDFLK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0064 467 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan3g0064 467 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 335 417 IPR013747 -
Lan3g0064 467 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
Lan3g0064 467 Gene3D - 61 418 IPR016039 GO:0016746
Lan3g0064 467 SUPERFAMILY Thiolase-like 243 419 IPR016039 GO:0016746
Lan3g0064 467 PANTHER 3-KETOACYL-COA SYNTHASE 1 457 - -
Lan3g0064 467 CDD CHS_like 19 416 - -
Lan3g0064 467 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 450 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan3g0064 467 PANTHER 3-KETOACYL-COA SYNTHASE 1 457 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0064 Lan-Chr3 433271 434992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0064 19 464 Acyl Lipid Metabolism Gene Families AT2G28630 67.105 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0064 K15397 - gmx:100776947 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0064 3 433271 434992 Lan8g1699 8 23871755 23873653 PCT
Lan8g1699 8 23871755 23873653 Lan3g0064 3 433271 434992 PCT