Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1686 ATGAGAACAAGCAACCATTTGATAGGTGCACTAAACTTCTTAACCTTCTTGCTTTCAATCCCAATCTTAGGAGGTGGAATATGGTTAAGCAACAGATCAAACAACACAGATTGTCTTCAATTCCTTCAATGGCCTCTCATCATAATAGGTATCAGCATCATGGTTATCTCCTTAGCAGGTTTCGCAGGCGCGTGTTACCGCAACACCTTTTTAATGAGACTCTACCTCGTTGCCATGTTCATAATCATAGCTGTGCTTATTGGGTTCATAGTATTTGCCTATGTTGTAACTGATAAAGGGTCCGGTCGAAGGGTTGTGAACCGGGTTTATTTGGATTATTATCTTCAAGATTACTCGGGTTGGCTTGAGGAGCGCGTGGCGAGTGATAGTTACTGGGGGAAGATTAGCTCGTGTGTTAGAGACTCTAACACGTGTCGTAAATTGGCTAGAAATTTTAATGGGGTGCCTGAATCTGCTGATATGTTCTACCTTAGAAGCCTCACCTCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGCTATATATATCAGAATGAGACAATATGGAACCTAGGAAATGGACTTATGTCAGCCAACCCAGACTGCACTAAGTGGAGCAATGAACAACAACAACTATGCTATGCTTGTGACTCATGCAAAGCTGGTGTGCTAGCTAGTGTTAGGAAAAGTTGGAGGAAAGTCTCAGTGATCAACATTGTTGTTATGATCATACTTGTAATTGTTTACATAATTGCTTATGCAGCATATAGGAACAATCGCAGGATGGATAATGATGAACCTTATGGTGAAGCAAGGATGACAAAGTCACAACCTAGCCATTTTCATTTTTAA 858 0.4138 MRTSNHLIGALNFLTFLLSIPILGGGIWLSNRSNNTDCLQFLQWPLIIIGISIMVISLAGFAGACYRNTFLMRLYLVAMFIIIAVLIGFIVFAYVVTDKGSGRRVVNRVYLDYYLQDYSGWLEERVASDSYWGKISSCVRDSNTCRKLARNFNGVPESADMFYLRSLTSIQSGCCKPPTDCGYIYQNETIWNLGNGLMSANPDCTKWSNEQQQLCYACDSCKAGVLASVRKSWRKVSVINIVVMIILVIVYIIAYAAYRNNRRMDNDEPYGEARMTKSQPSHFHF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1686 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Lan8g1686 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
Lan8g1686 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Lan8g1686 285 PRINTS Transmembrane four family signature 6 29 - -
Lan8g1686 285 PRINTS Transmembrane four family signature 39 65 - -
Lan8g1686 285 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1686 Lan-Chr8 23751121 23754657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1686 1 276 Miscellaneous Gene Families AT5G60220 70.652 1.63e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1686 - - gmx:100788977 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0276 7 1773138 1776695 Lan8g1686 8 23751121 23754657 LSH
Lan6g1955 6 30486161 30488674 Lan8g1686 8 23751121 23754657 PCT
Lan8g1686 8 23751121 23754657 Lan6g1955 6 30486161 30488674 PCT