Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1955 ATGAGAACTAGTAACCACTTAATCGGTCTTCTAAACTTCTTAACCTTCTTGCTCTCAATACCAATCCTAGGAAGTGGTATATGGCTAAGTACCAGAGCCAACAACACAGATTGCCTCAATTTTCTTCAATGGCCTTTGATCATTATAGGAGTTTCCATCATGGTCATTTCCTTAGCAGGTTTTGCAGGTGCATGTTACAGAAACACATTACTTATGAGGCTCTACCTTATTATCATGTTCCTCATCATTGCAGTGCTCATAGGGTTCATAATCTTTGCTTATGTTGTTACTGACAAGGGCTCAGGAAGGTTTGTACCTAATAGAAGTTACTTGGATTATTATATTCAGGATTATTCTGGTTGGTTAGAGGAACGTGTAGCAAGTGATGAATATTGGGGTAAGATTAGGTCTTGTGTTAGGGATTCTAGGGTTTGTAGTAAGCTTAGGAGAATCGTTGGTGGGGTACCTGAATCTGCTGATATGTTCTATATCAGAAAGCTCACTCCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGAGTGTGATTATATCTATGAAAATGAGACAATATGGAAGCCAGGAATGGGACTAATAGGAACAAATGCAGACTGCACTAGATGGAGTAATGATCAAGAATCACTTTGCTATGCATGTGATTCATGCAAAGCTGGTGTATTGGCTAGTCTCAAGAAAAGTTGGAGGAAAGTTTCAGTGATAAATATTGTTGTTATGATTATTCTTATCATTGTTTATATCATTGCTTATGCAGCATATAGGAACAATCGTAGGATGGATAATGATGAACCATTTGGTGGAGCAAGGATGACAAAGGCAAGACCTAGCAGAATTCATCTTTAA 858 0.3858 MRTSNHLIGLLNFLTFLLSIPILGSGIWLSTRANNTDCLNFLQWPLIIIGVSIMVISLAGFAGACYRNTLLMRLYLIIMFLIIAVLIGFIIFAYVVTDKGSGRFVPNRSYLDYYIQDYSGWLEERVASDEYWGKIRSCVRDSRVCSKLRRIVGGVPESADMFYIRKLTPIQSGCCKPPTECDYIYENETIWKPGMGLIGTNADCTRWSNDQESLCYACDSCKAGVLASLKKSWRKVSVINIVVMIILIIVYIIAYAAYRNNRRMDNDEPFGGARMTKARPSRIHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1955 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Lan6g1955 285 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
Lan6g1955 285 PRINTS Transmembrane four family signature 6 29 - -
Lan6g1955 285 PRINTS Transmembrane four family signature 39 65 - -
Lan6g1955 285 PRINTS Transmembrane four family signature 66 94 - -
Lan6g1955 285 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1955 Lan-Chr6 30486161 30488674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1955 1 277 Miscellaneous Gene Families AT5G60220 70.758 3.59e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1955 - - gmx:100798336 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1955 6 30486161 30488674 Lan7g0276 7 1773138 1776695 PCT
Lan6g1955 6 30486161 30488674 Lan8g1686 8 23751121 23754657 PCT
Lan7g0276 7 1773138 1776695 Lan6g1955 6 30486161 30488674 PCT
Lan8g1686 8 23751121 23754657 Lan6g1955 6 30486161 30488674 PCT