Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1630 ATGCAGCAACCGAATCTGTTTCCCTTTTTAAGCCTTATTGGGAATCCTTTCATTTTCAATGGTGACGATTTGAGTGACGGGATCGAAGGTTCTAGGGTTTTCTTTTTGCTTCCTTTCTTATTTCTATCTCAAGGTGGAGCTATGGATTTGTCTAAGGTTGGTGAAAAGATTTTTAGCTCTGTTAGGTCTGCCAGATCCATGGGATTGCTCCCTGCATTTTCTGATCGCCCTGAGGTTCCAGCTCGAGCTGCAGCTGCAGCTGCTGTAGCTAGAGCTCTTGCAGGATTGCCTCCTCATCAGAGGTATAGCCTTTCATCAAGTTCAGAAGAGCTGAGTTCAATATATGGAAGCAGTCCTCATGGCGATGCAGTGGAGGAACTAGAGGATGGATTCTATGAGGAGGGGTTTGATCCAATTAGGCATGTTTTAGAGCTCGTTCCAGCTGATGAAAACGAGCTAACCTATTTTGAAAAACAGGCTGCCCTTAGATTGATACAGCTGGATAGAGTAGCAGAGCGTTTATCTCGCAACGTGATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTAGAGAAGGACTTGAGAGTTGCAAATGTCATCTGCATGAATGGAAGAAGACACTTGACGTCATCTATGAATGAGGTTTCAAGGGATCTCATTGTGAATTCTTGTTCAAAAAAGAAACAAGCTCTTATGGATGTGCTTCTAATCTTGACCGAACTACGACGTGCTTTGGACATGCAATCAGCACTTGAATCCCTTGTTGAGGAAGGGAATTACTGCAAGGCATTTCAAGTCCTATCTGAGTATTTGCAAATCTTGGATAGTTTGTCAAAGCTTTCAGCAATACAAGATTTGAGTTGTGGTGTAGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTGTTTTATTGGGAGTATGTCAAGAATTCAAAGAAGATGGCTATATAACAGTAATTGATGCCTATGCATTAATAGGGGATACCACTGGTCTTGCTGAAAAGATACAGAGTTTTTTCATGCAAGAAGTTATATCAGAAACACAATCCGTGTTAAAGGCTGTTGTGCATGAGGATGAGGAGGGGCTTTCACAGAATAGTAGGCTCACTTACAGCGACCTGTGCCTTCAAATACCCGATTCTAAGTTTAGACAGTGCTTATTAAGAACATTGGCTGTTCTATTTGACCTGATGTGTTCATACCACGGAATTATGGATTTTCAGCCAGAGAGAAAGGACTCAGCAGCACAAACTCCAAATCAGTGCAATGAAGCCATTTCCTGTAGTCCAGGTCAGGAAGTTGATTCAAATGTAAGAGCCTGCAACAATTCTATGACTACTTCTGGAGATGTAATACATGATTCATCTTCTAGGGAGGAATCTACAAAAGTCAGTTCACTAACTGAAACTACTGGAACTACGGGATCACCGCACAGTGGTTCTCATAATCCAGTCAATGAAGCTAGAAAGGAGGACAGTGCAGCATCAACCATTGATTCCCCATGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCTCAAACCCTTCAAAGAGGACGCAGGAACCTGTGGCATCTCAGTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTGCAGCTTGTCATGCAAGCATTCATCAATTCTTGAAAAACTATGAAGATCTCAATGTCTTTATTTTGGCTGGGGAAGCCTTTTGTGGATTTGAAGCAGTTGAATTCAGGCAGAAGTTGAAGGTTGTTTGTGAAAACTATTTCATAGCTTTGCATCGACAAAATATGAATGCACTAAAAATGGTATTGGAGAAAGAGACTTGGTTAAGATTACCTCCAGATACAGTGCAAATTATCAGTTTCGCTGGACTTGTTGGTGATGGAGCACCATTGATTTCTTTGTCTAGTGGTAAATCAGTTAATGTTAGTGCGGCCCATTCCAATAAATCAATGAGCATGGTTCACACTGGTCCTAGGAGGAGTGGGTTCTCTCATTGGATTAAAAGTGGAAACCCTTTTCTGCAAAAAATAACAATCTCTAAAGAGGGTCATGGTTACTCCCAACCTAATGGATCAATTTATGGTGAATTTGATGGAGGTTCAAGCAAAAACTTTCAAGGTGATAAAGTATCACCTAGAAAGAATGATTCCAATAACATGAATGGTGCCAATTCAGTTTCAGAAGATGAAAATGAGGATCTTCTTGCAGACTTTATTGATGAAGATAGTCAACTGCCAAGTCGGATTTCAACATCCAGTCATTCAAGAAGTAATTCTTTACATGGTAATGAGGAAGAGAATACAATACAAACTGGGTCTTCTCTATGTCTTTTAAGGTCTATGGATAAATATGCAAGGCTTATGCAGAAACTAGATGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTTTAAATTTTTTTTCTACCTTGTATATGACACATTTGGTAAACAAAACACTAGTTCAAGTGGAAAAACCTCAACTAACTCTCTTAATTATCGGTTGAGGACAGTCTTATCTAAAATAAACGAAGATTGTGATGAGTGGATTAAGCCACAATCGTCTTCACCAATGTCTTTTGGTTCATCATTTGTACATGCAGAGTTAACACCTGCAAGCCCTCCCAGCACGAATTTTGCTCACTCCTCTGGGTCTTCTTTTGGTCTCAAGGAAAGATGTGTGGCTGTTGATACTATGTCTCTTGTTGCTCGAATACTGAACAGATCTAAAGCTCATCTCCAATCAATGCTTTTGCTAAGTAATTCAAATGTGCTTGAAGATTTCTATTCTCATCTGGTGGATGCTGTACCAGATCTTATAGAGCATGTTAATCGGACAACTGTGAGACTACTGCTGCACATTAATGGGTACGTTGAACGTATTGCGAATACTAAATGGGAAGTAAAAGAGCTCGGGATGGAGCATAATGGTTATGTTGACTTGTTACTGGGAGAATTTAAGCACTATAAAACACGCCTTGCTCACGGAGGAATTCGTAAAGAGACTCAAGACCTTTTATCAGACTATGGGCTTGAAATTGTGGCAGAAACTCTTGTTGAAGGACTTTCACGAGTGAAGAGATGTAGTGATGAGGGACGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATCAACGGCCTACAGCATTTTGTGTCATTGAATGTGAAGCCCAAGCTACAAACGGTTGAAACTTTTATTAAGGCTTACTACCTTCCTGAGACAGAATATGTGCATTGGGCACGTGCGCACCAGGAATACACTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTGGCCACTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGAAGTACTGGAAAAGATTGAGTGA 3372 0.4075 MQQPNLFPFLSLIGNPFIFNGDDLSDGIEGSRVFFLLPFLFLSQGGAMDLSKVGEKIFSSVRSARSMGLLPAFSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSSPHGDAVEELEDGFYEEGFDPIRHVLELVPADENELTYFEKQAALRLIQLDRVAERLSRNVMEHHEVMVKGMNLVRELEKDLRVANVICMNGRRHLTSSMNEVSRDLIVNSCSKKKQALMDVLLILTELRRALDMQSALESLVEEGNYCKAFQVLSEYLQILDSLSKLSAIQDLSCGVEVWLGRTLQKLDAVLLGVCQEFKEDGYITVIDAYALIGDTTGLAEKIQSFFMQEVISETQSVLKAVVHEDEEGLSQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLMCSYHGIMDFQPERKDSAAQTPNQCNEAISCSPGQEVDSNVRACNNSMTTSGDVIHDSSSREESTKVSSLTETTGTTGSPHSGSHNPVNEARKEDSAASTIDSPWYHLRKEATTFVSQTLQRGRRNLWHLSASRVSVLLSSAAACHASIHQFLKNYEDLNVFILAGEAFCGFEAVEFRQKLKVVCENYFIALHRQNMNALKMVLEKETWLRLPPDTVQIISFAGLVGDGAPLISLSSGKSVNVSAAHSNKSMSMVHTGPRRSGFSHWIKSGNPFLQKITISKEGHGYSQPNGSIYGEFDGGSSKNFQGDKVSPRKNDSNNMNGANSVSEDENEDLLADFIDEDSQLPSRISTSSHSRSNSLHGNEEENTIQTGSSLCLLRSMDKYARLMQKLDVVNVEFFKGICQLFKFFFYLVYDTFGKQNTSSSGKTSTNSLNYRLRTVLSKINEDCDEWIKPQSSSPMSFGSSFVHAELTPASPPSTNFAHSSGSSFGLKERCVAVDTMSLVARILNRSKAHLQSMLLLSNSNVLEDFYSHLVDAVPDLIEHVNRTTVRLLLHINGYVERIANTKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRKETQDLLSDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHFVSLNVKPKLQTVETFIKAYYLPETEYVHWARAHQEYTKSQIVGLVNLVATMKGWKRKTRLEVLEKIE* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1630 1123 MobiDBLite consensus disorder prediction 708 733 - -
Lan8g1630 1123 MobiDBLite consensus disorder prediction 708 732 - -
Lan8g1630 1123 PANTHER UNCHARACTERIZED 1 1123 IPR040047 GO:0032456|GO:0042147|GO:1990745
Lan8g1630 1123 MobiDBLite consensus disorder prediction 446 500 - -
Lan8g1630 1123 Pfam Vacuolar-sorting protein 54, of GARP complex 124 413 IPR019515 -
Lan8g1630 1123 MobiDBLite consensus disorder prediction 467 489 - -
Lan8g1630 1123 MobiDBLite consensus disorder prediction 750 770 - -
Lan8g1630 1123 Pfam Protein of unknown function C-terminus (DUF2451) 893 1123 IPR019514 -
Lan8g1630 1123 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 1 1123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1630 Lan-Chr8 23271433 23289954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1630 K23288 - gmx:100788476 1810.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1630 8 23271433 23289954 Lan13g0413 13 2857142 2878090 LSH