Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0413 ATGCAGCAACCGAATCTGTTCCCTATTGGAAACTTTTTGGGGAATCCTTTCATTTTCAATGGCGACGATTTGAGTGACGGAATCGAAGGTTCTAGGGTTTTCTTATTGCTTCCTTTCTTCTTGCTCTCTCAAGGTGGAGTTATGGATTTTTCCAAGGTCGGCGAAAAGATCTTGAGTTCAGTTAGGTCCGCTAGATCCATGGGATTGCTTCCTCCACCTTCTGATCGTCCTGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGATTGCCTCCTCACCAGAGGTACAGTCTTTCATCAAGTTCAGAAGAACTGAGTTCAATATATGGAAGCAGACCTCATGGTGAAGTAGTGGAGGAACTAGAGGATGGATTCTATGAGGAGGAGTTTGATCCAATTAGGCATGTTTTAGAGCTCCTTCCAGCTGATGAAAACGAGCTAACCTATTTTGAAAAACAGGCTACCCTTAGATTGACACAGCTGGATAGAGTCGCAGAACGTTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGAGAATTAGAGAAGGACTTGAGAATTGCAAATGTCATCTGCATGAATGGAAGAAGACATTTGACATCATCTATGAATGAGGTTTCAAGGGATCTCATTGTGAATTCTTATTCAAAAAAGAAACAAGCTCTTTTGGACGTGCTCCCAATATTGACTGAACTACGACGTGCTTTGGACATGCAGTCAATACTTGAATCCCTTGTAGAGGAGGGGAATTACTGCAAGGCATTTCAAGTCCTATCTGAGTATTTGCAAATCTTAGATAGTTTGTCACAGCTTTCATTAATACAAGATATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTACAGAAGCTGGATGCTCTTTTAGTGGGAGTATGTCAGGAATTCAAAGAAGATGGCTACATAACAGTAATCGATGCCTATGCATTAATAGGGGATACCACTGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATATCAGAAACACACTCTGTTTTAAAGGCTGTTGTGCATGAGGATAAGGACGGGCTTTCACAAAACAACTGCCTTTATAGTTGCTATTCCAATTCCAGGCTCACTTACAGCGACCTATGCCATAAAATACCCGATTCTAAGTTTAGGCAATGCTTATTAAGAACATTGGCTGTTATATTTGACCTTATGTGCTCATACCATGGAATTATGGATTTTCAGCTAGAGAGAAAGGACTCAGCAGCACAAACTACGGATAAGTGCAATGAAGTCATTTCCTGTAGTACAGGTCAGGAAGTTGATTCAGATGTAAGAGCCTGCAACAATTCTATGACCACTGCTGGAGATGTAATACATGACTTATCTTCTAGGGAGGAGTCTACAACAGTCAGCCCACTGACTGAAACTACAGGTTCATCACACAGTGATTCTCATAATCCAGTTAATGTGACTAGAAAGGAGGACAGTCCAGCATCAAGCATTGAATCCCCATGGTACCATCTTCGCAAAGAAGCTACAACATTTGTTTCCCAAACCCTTCAAAGAGGACGCAGGAATCTGTGGCATCTCAGTGCAAGTCGTGTGTCAGTATTGCTTTCTTCTGCTGCAGCTTGTTCTGTAAGCATTCATCAATTCTTGAAAAATTATGAAGATCTCAATGCCTTCATTTTGGCTGGGGAAGCATTTTGTGGATTTGAAGCAGTTGAATTCAGGCAGAAGTTGAAGGTTGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGTGCATGCACTAAAAATGGTATTGGAGAAAGAGACTTGGTTAACGTTGCCTCCAGATACAGTGCAAATTGTCAGTTTTGTTGGACTTATTGGTGATGGAGCTCCCTTGATTTCTTTATCTAGTGGTAAATCAGTTAATGTTAGTGCAATCCATTCCATTAAATCAATGGACATGGTCCACACCAGTCCTGGGAGGAGTGGGTTCTCTCATTGGATTAAAAGTGGAAACCCTTTTCTGCAAAAAGCAACAATCTCCAAAGAAGGTCATGGTTACTCCCAACCTAATGGATCGATTTATGGTGAATTTAATGGAGGTTCAAGCAACAACTTTCATGGCGATAAAGTATCACCTAGAAAGAATGATTCCGACCACATGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCAGATTTTATTGATGAAGATAGTCAACTGCCAAGTCGAATATCTAAACCCAGTCATTCAAGAAGTAACTCTTCACGTGGTGACGACGAAGAAAGTACAATACAAACTGGGTCTTCACTATGCCTTTTAAGGTCTATGGATAAATATGCAAGGCTTATGCAGAAACTAGAAGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTTTGAAATTTTTTTCCACCACATATATGAAACATTTTGTCAACAAAAGACTAGTTCAAGTGCAAAAAACTCAACCAACTCTCTTAATTATCGGCTGAGAACAGCCTTATCTAGAATAAACCAAGATTGTGAAGAATGGATTAAGCCACAATCATCTTCACCCATGTCTTTTGGTTCATCATTTGTAAATGCCGATTTAACACCTGCAAGCCCTCCCAGCACGAATTTTGCTCACTCTTTTGGTCTCAAGGAAAGATGTGTGGCTGTTGACACTATGTCTCTTGTTGCTCGAATACTGAATAGATCCAAAGCTCATATCCAATCAATGCTTTTGCTAAGTAATTCAACTGTACTTGAAGATTTCTATTCTCATATGGTGGATGCTGTACCAGATCTTATAGAGCATGTTAACCGGACAACTGCGAGACTACTGTTGCACATTAATGGGTATGTCGAACGTATTGCCAATACTAAATGGGAAGTAAAAGAGCTTGGGATGGAGCATAATGGCTATGTTGATTTGTTGCTGGGAGAATTTAAGCACTATAAAACTCACCTTGCTCATGGAGGAATTCGCAAAGAGGCTCAAGATCTATTATCAGCCTATGGGCTTGAAATTGTGGCAGAAACTCTTGTGGAAGGACTTTCAAGAGTGAAGAGATGTAGTGATGAAGGACGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATCAACGGGCTACGACATTTTGTGTCATTGAATGTGAAGCCCAAGCTACAAATAGTTGAAACTTTTATTAAGGCTTACTACCTTCCTGAGACGGAATATGTGCATTGGGCACGTGCACACAAGGAATACAGTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTAGCTACCATGAAAGGGTGGAAGAGGAAAACCAGGTTGGAAGTACTGGAAAAGATTGAATGA 3378 0.4076 MQQPNLFPIGNFLGNPFIFNGDDLSDGIEGSRVFLLLPFFLLSQGGVMDFSKVGEKILSSVRSARSMGLLPPPSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPHGEVVEELEDGFYEEEFDPIRHVLELLPADENELTYFEKQATLRLTQLDRVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDVLPILTELRRALDMQSILESLVEEGNYCKAFQVLSEYLQILDSLSQLSLIQDMSRGVEVWLGRTLQKLDALLVGVCQEFKEDGYITVIDAYALIGDTTGLAEKIQSFFMQEVISETHSVLKAVVHEDKDGLSQNNCLYSCYSNSRLTYSDLCHKIPDSKFRQCLLRTLAVIFDLMCSYHGIMDFQLERKDSAAQTTDKCNEVISCSTGQEVDSDVRACNNSMTTAGDVIHDLSSREESTTVSPLTETTGSSHSDSHNPVNVTRKEDSPASSIESPWYHLRKEATTFVSQTLQRGRRNLWHLSASRVSVLLSSAAACSVSIHQFLKNYEDLNAFILAGEAFCGFEAVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLTLPPDTVQIVSFVGLIGDGAPLISLSSGKSVNVSAIHSIKSMDMVHTSPGRSGFSHWIKSGNPFLQKATISKEGHGYSQPNGSIYGEFNGGSSNNFHGDKVSPRKNDSDHMNGANSVSEDENEDLLADFIDEDSQLPSRISKPSHSRSNSSRGDDEESTIQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFHHIYETFCQQKTSSSAKNSTNSLNYRLRTALSRINQDCEEWIKPQSSSPMSFGSSFVNADLTPASPPSTNFAHSFGLKERCVAVDTMSLVARILNRSKAHIQSMLLLSNSTVLEDFYSHMVDAVPDLIEHVNRTTARLLLHINGYVERIANTKWEVKELGMEHNGYVDLLLGEFKHYKTHLAHGGIRKEAQDLLSAYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLRHFVSLNVKPKLQIVETFIKAYYLPETEYVHWARAHKEYSKSQIVGLVNLVATMKGWKRKTRLEVLEKIE* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0413 1125 MobiDBLite consensus disorder prediction 755 778 - -
Lan13g0413 1125 PANTHER UNCHARACTERIZED 1 1125 IPR040047 GO:0032456|GO:0042147|GO:1990745
Lan13g0413 1125 MobiDBLite consensus disorder prediction 714 738 - -
Lan13g0413 1125 MobiDBLite consensus disorder prediction 473 507 - -
Lan13g0413 1125 Pfam Protein of unknown function C-terminus (DUF2451) 895 1125 IPR019514 -
Lan13g0413 1125 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 1 1125 - -
Lan13g0413 1125 MobiDBLite consensus disorder prediction 472 508 - -
Lan13g0413 1125 Pfam Vacuolar-sorting protein 54, of GARP complex 124 422 IPR019515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0413 Lan-Chr13 2857142 2878090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0413 K23288 - gmx:100788476 1790.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1630 8 23271433 23289954 Lan13g0413 13 2857142 2878090 LSH