Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1628 ATGGGGTATTCAAGTTCTTTCTTCACTTGCTTTCTTCTTCTAGCTGTGGTCAATGGAAAGCCTGTGGTCCCTGCATTGTTCATATTTGGTGATTCTATTGGTGACAACGGCAATAATAACCAACTACTTACTTTTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAAGAATCACACCCCTACAGGAAGGTTCTGCAATGGAAAGCTTGCCACAGACTTCATTGCTGAAATCCTTGGATTTACTTCTTACCAACCAGCTTACATCAACTTAGAGGACAAAGGAAATAACCTCTTGAATGGTGCCAACTTTGCTTCAGCTGCTTCCGCTTTTTATGATGTTATACCCATGCTATATAATACAATTCCATTACACAGGCAGCTCGAGTACTATAAAGAGTGCCAGAGTAAATTGGTGGAAATAGCAGGGCAATCAAAAGCTTCATCAATTATATCAAGTGCAATATATATGGTTATTATTGGCTGCAGTGACTTTCTTAACTATTACACAAACGTTCTGGTTCACAATGGTCATACGGTTGATCAATTTTCAGACATTCTATTGCAAAGCTATTCAAAATACATTCAGCATCTATATGCATTGGGAGCAAGGAGGATAGGTGTGACAAACTTAGCTCCAACGGGTTGCTTGCCAATACTCATTACTCTCTTCGGCTCTCATAGCAATGGATGTGTAGGCCGGCTAAACAAAGATGCTATTTATTACAATAAAAAGCTGAATTACACATCTGAGAAGTTGCAAAAATTGCTTCCTGACTTGAATTTGGTTGTCTTTGACATCTACCAACCTTTATATAATCTTGTAACTAAGCCTTCTGAAAATGGATTTCTTGAAGCAAGGAGGGGTTGTTGCGGAACGGGTTTTATAGAGTTGTCTATTTTGTGCAATGAGAAGTCAATCGGAACATGTGCTAATGCATCTGAATATGTATTTTGGGATAGTGTTCATCTTACCGAGGCTGCAAACAAGCTTTTGGCGGATCAAATGGTAGCTGCTGGCATCTTTCAGCTTATATCTTAA 1044 0.3898 MGYSSSFFTCFLLLAVVNGKPVVPALFIFGDSIGDNGNNNQLLTFVKANFPPYGRDFKNHTPTGRFCNGKLATDFIAEILGFTSYQPAYINLEDKGNNLLNGANFASAASAFYDVIPMLYNTIPLHRQLEYYKECQSKLVEIAGQSKASSIISSAIYMVIIGCSDFLNYYTNVLVHNGHTVDQFSDILLQSYSKYIQHLYALGARRIGVTNLAPTGCLPILITLFGSHSNGCVGRLNKDAIYYNKKLNYTSEKLQKLLPDLNLVVFDIYQPLYNLVTKPSENGFLEARRGCCGTGFIELSILCNEKSIGTCANASEYVFWDSVHLTEAANKLLADQMVAAGIFQLIS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1628 347 PANTHER GDSL-MOTIF LIPASE 7 343 - -
Lan8g1628 347 SUPERFAMILY SGNH hydrolase 26 339 - -
Lan8g1628 347 Pfam GDSL-like Lipase/Acylhydrolase 26 336 IPR001087 GO:0016788
Lan8g1628 347 PANTHER GDSL ESTERASE/LIPASE EXL3 7 343 - -
Lan8g1628 347 Gene3D SGNH hydrolase 15 341 IPR036514 -
Lan8g1628 347 CDD SGNH_plant_lipase_like 24 337 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1628 Lan-Chr8 23245928 23247556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1628 21 337 Acyl Lipid Metabolism Gene Families AT4G10950 31.250 2.92e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1628 - - gmx:100775618 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0158 10 1024877 1027297 Lan8g1628 8 23245928 23247556 PCT
Lan8g1628 8 23245928 23247556 Lan10g0158 10 1024877 1027297 PCT