Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0158 ATGGAGAATTCAAGTTATTTCTTGACTTGCATGGTTATGGTTTTAGTTGTTGTAGTGGTTAATGGACAGCCTCTGGTGCCTGCATTGTTCATATTTGGAGACTCAGTGGTGGATGTGGGAAATAACAACAATTTAGACACCATTGTTAAAGCAAATTTTCCTCCTTATGGAAGAGACTTCAATAATCACATGTCAACTGGGAGATTCTGCAATGGAAAACTTGCCACAGATTACACTGCTGAAAATCTTGGATTTACCACTTACCCACCAGCTTATCTTAGCTTAAAATCCAAAGGAACGAATCTATTGAATGGGGTCAACTTTGCCTCTGCTTCTTCTGGCTACTATTCTGCAACAGCCAAACTATATCATGCAATTCCACTAAATGACCAGCTGGAGCACTTCAAAGATTGCCTCAATATATTGGTGGGAGTGGCAGGGAAATCAAATGCTTCATCAATTATATCTGGTGCCATATATGTTATTAGTGCCGGAAATAGTGACTTTATTCAAAACTATTACCTGAATCCTTTGCTTTACAAGGTCTACACTGCTGATCAATTCTCAGACTTTCTAGTGCAGAACTATGTCAATTTTATTCAGAATTTATATGCACTTGGAGCAAGGAGGATTGGTGTGACAACATTACCTCCAATGGGTTGCTTGCCTGCAGCCATCACTCTCTATGGTTCTGATAGCAACGAGTGCGTCGAGAGGCTTAACCATGATGCTGTTAACTTCAATAAAAAGCTAAATACCACATCACAGAGCTTGCAGAAACAACTTCCTGACCTCAAATTGGTCGCCTTTGATATCTACCAACCTCTCTATGACCTTGTTACCAAGCCTACTGAAAATGGATTTTTTGAATCAAGGAAGGCTTGTTGTGGAACTGGATTGCTAGAAACATCTGTATTGTGTAATAACAAGTCCATCGGAACATGCGCCAATGCATCGGAATATGTATTCTGGGATGCTTTTCATCCCACAGATGCTGCAAACAAGATTTTGGCAGAAGATTTGCTCATTGCTGGCATCTCTCTCATATCCTAA 1053 0.4008 MENSSYFLTCMVMVLVVVVVNGQPLVPALFIFGDSVVDVGNNNNLDTIVKANFPPYGRDFNNHMSTGRFCNGKLATDYTAENLGFTTYPPAYLSLKSKGTNLLNGVNFASASSGYYSATAKLYHAIPLNDQLEHFKDCLNILVGVAGKSNASSIISGAIYVISAGNSDFIQNYYLNPLLYKVYTADQFSDFLVQNYVNFIQNLYALGARRIGVTTLPPMGCLPAAITLYGSDSNECVERLNHDAVNFNKKLNTTSQSLQKQLPDLKLVAFDIYQPLYDLVTKPTENGFFESRKACCGTGLLETSVLCNNKSIGTCANASEYVFWDAFHPTDAANKILAEDLLIAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0158 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Lan10g0158 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Lan10g0158 350 Gene3D SGNH hydrolase 18 344 IPR036514 -
Lan10g0158 350 PANTHER GDSL-MOTIF LIPASE 8 349 - -
Lan10g0158 350 SUPERFAMILY SGNH hydrolase 29 341 - -
Lan10g0158 350 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0158 Lan-Chr10 1024877 1027297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0158 24 341 Acyl Lipid Metabolism Gene Families AT4G10950 36.562 3.50e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0158 - - gmx:100804640 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0158 10 1024877 1027297 Lan8g1628 8 23245928 23247556 PCT
Lan8g1628 8 23245928 23247556 Lan10g0158 10 1024877 1027297 PCT