Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1620 ATGAGAGACATAGTTTCATGTTTCAGCGAGAACTCAGTAAATGTGTCTCGTTCTTCATGTTCTACCTATTCAAAAAACGCTTGTATCTCTCCAAGCCTTGTACCTTCAACTCAAAACTCAGTTTCCAATGTCTACAAACTTGTCCTCTTCAACCTCAAACAACTCTTGATCACTGTTACTTGGTGTAAGAGTCATTCCAACCAAGGATTCAGCATAAGCTTTGGTGATAATAATCATGACCCTTCAGCTTCAGCACCCTTTAGACTCAACACAAATTCAAGGTTTTTCAGGAAGAAAAAAGGTAGCAAATTGCTTGAATTATGTGATGATTCAAAAGTTGAAGTCTTCTGGGACCTCTCAAATGCAAAATATGAAGCTGGACCTGAACCTGTTGAAGGGTTTTATGTAGTGGTTATGGTTGATTCAGAAATAGGACTTGTTATTGGTGATAACATAGCAGAAGAAGCATTTTTCAAGAAGTTCAAAACCAGCACCAACCATGTTGCTAAAGTTTCTCTTTTATCAAGAAGAGAACATTGTTCTGGCAACACACTTTACACAACCAAGGCGCAATTCTGTGACACTGGAACATTCCATGATGTGATGCTAAGGTGCAGTGTTGAGAATGAAGGAGGAGGGTTAATGAACTCATCATCTTCACCAGTTCTATCTGTTTGCATTGATAAGAAAACTGTGATCCGTGTGAAGAGGCTGCAATGGAATTTTAGGGGTAACCAAACAATTTTTGTTGATGGGTTGTTGGTTGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAACCCTGCTTCTTCTAATGGCTATGCAGTGTTCATGTTCAGAACTAGGAGTGGTTTGGATAGTAGATTGTGGTTAGAGGAAAAGACTGCACATAAAGATAAAGATCGAGTTGAATTCTCCTTGTTGATCTATGCTTATGCCTTGACATGTGTTTATGACTACTTGGTCCCTCCATTTCTCAAAGTTCACTGCCAGAAACAAAAATCACTGCCAAACACTGTGGTTCATGGCATGGTAATAGCTATAGCATTGGCAAAAACAATGATTGTAGTTCTATATATATGGAAAATTGAGACATTTCTGCTTTAG 1107 0.3848 MRDIVSCFSENSVNVSRSSCSTYSKNACISPSLVPSTQNSVSNVYKLVLFNLKQLLITVTWCKSHSNQGFSISFGDNNHDPSASAPFRLNTNSRFFRKKKGSKLLELCDDSKVEVFWDLSNAKYEAGPEPVEGFYVVVMVDSEIGLVIGDNIAEEAFFKKFKTSTNHVAKVSLLSRREHCSGNTLYTTKAQFCDTGTFHDVMLRCSVENEGGGLMNSSSSPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPASSNGYAVFMFRTRSGLDSRLWLEEKTAHKDKDRVEFSLLIYAYALTCVYDYLVPPFLKVHCQKQKSLPNTVVHGMVIAIALAKTMIVVLYIWKIETFLL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1620 368 PANTHER EXPRESSED PROTEIN 1 312 IPR008586 -
Lan8g1620 368 Pfam Plant protein of unknown function (DUF868) 36 312 IPR008586 -
Lan8g1620 368 PANTHER DUF868 FAMILY PROTEIN 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1620 Lan-Chr8 23175393 23177805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1620 1 312 EF-hand Containing Proteins AT5G28150 37.539 6.78e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1620 - - lang:109353379 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0348 7 2392899 2394368 Lan8g1620 8 23175393 23177805 LSH
Lan8g1620 8 23175393 23177805 Lan13g0423 13 3032659 3034076 LSH
Lan6g2036 6 31110146 31111268 Lan8g1620 8 23175393 23177805 PCT
Lan10g0167 10 1091091 1092705 Lan8g1620 8 23175393 23177805 PCT
Lan8g1620 8 23175393 23177805 Lan6g2036 6 31110146 31111268 PCT
Lan8g1620 8 23175393 23177805 Lan10g0167 10 1091091 1092705 PCT