Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0167 ATGAGAGACATAGCTTCATGTTTCAGCGAGTATGCAGTGAATGTGACACCACATTCCTCATGTTCAAGCTTTACAAACAACACTTGTATATCTCCAAGCCTTGCACCTTCGACCCAAAATTCAGTTTCTTCTGTATACAAAACAATCCTTTCCAACAATCAAAAACACTTTTTGATCACAGTCACATGGTGTAAGAGTCACTTAAATCAAGGACTTGAGGTCAGTTTTGGTGAAGAAGAAACAATCTTCAGACTTAACACCAATTCAAGGTTTTTCAGGAAGATGAAAGGAAGCAAATTGGTTGAATCTGATGAGTCAAAGATTGAAATCTTCTGGGATCTTTGCAATGCAAAATATGATGCTAGTCCTGAACCTGTTAATGGTTTTTATGTTGCAATTCTTGTTGATTCAGAAATAGTCCTTATTCTAGGTGAAGAAACTATGACCAAAAAGTTTAAAACTAGGACAACCCCAATGGCTAAAGTCTCACTCTTATCACGAAGAGAACATTGTTCAGGTAACACACTTTACACAACAAAGGCTCAGTTCTCTGAAAATGGTACTTGGCATGACATTTTGATCAGATGCAGTGGAGAAAATGAAGGGCTGAAGTATCCAGTTATGTCTGTTTGTATTGATAACAAGACCGTGATTCGTGTGAAGAGGCTGCAATGGAATTTCAGGGGTAACCAGACACTTTTTGTTGATGGGTTGCTTGTGGATTTGTTGTGGGATGTTCATAACTGGTTTTTCAACCATGCACCCGCTTCTGGTTATGCAGTTTTCATGTTCAGGACTAGGAATGGTTTGGATAGTAGATTGTGGTTAGAGGAGAAGTCAGAACAGAAAGATGAAGATACAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATAA 903 0.3832 MRDIASCFSEYAVNVTPHSSCSSFTNNTCISPSLAPSTQNSVSSVYKTILSNNQKHFLITVTWCKSHLNQGLEVSFGEEETIFRLNTNSRFFRKMKGSKLVESDESKIEIFWDLCNAKYDASPEPVNGFYVAILVDSEIVLILGEETMTKKFKTRTTPMAKVSLLSRREHCSGNTLYTTKAQFSENGTWHDILIRCSGENEGLKYPVMSVCIDNKTVIRVKRLQWNFRGNQTLFVDGLLVDLLWDVHNWFFNHAPASGYAVFMFRTRNGLDSRLWLEEKSEQKDEDTVEFSLLIYACKST* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0167 300 Pfam Plant protein of unknown function (DUF868) 37 298 IPR008586 -
Lan10g0167 300 PANTHER EXPRESSED PROTEIN 1 299 IPR008586 -
Lan10g0167 300 PANTHER DUF868 FAMILY PROTEIN 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0167 Lan-Chr10 1091091 1092705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0167 1 298 EF-hand Containing Proteins AT3G04860 36.093 1.19e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0167 - - gmx:100798692 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2036 6 31110146 31111268 Lan10g0167 10 1091091 1092705 LSH
Lan10g0167 10 1091091 1092705 Lan7g0348 7 2392899 2394368 PCT
Lan10g0167 10 1091091 1092705 Lan8g1620 8 23175393 23177805 PCT
Lan10g0167 10 1091091 1092705 Lan13g0423 13 3032659 3034076 PCT
Lan7g0348 7 2392899 2394368 Lan10g0167 10 1091091 1092705 PCT
Lan8g1620 8 23175393 23177805 Lan10g0167 10 1091091 1092705 PCT
Lan13g0423 13 3032659 3034076 Lan10g0167 10 1091091 1092705 PCT