Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1610 ATGGAATTGGGAAGCATAACCCAATTCCTTCAGGACAAGAATGTTTTGGTCGTTGGTGCCACTGGCTTCCTTGCTAAAATTTTTGTGGAGAAGGTACTGAGAGTGCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATACAGAATCTGCCACTCGAAGATTGCAAAATGAGATTATACAAAAGGATCTATTTAGATTGTTGAAGGAAAATCTTGGTGCAAAATTCAATTCCTTTATCTTAGAAAAGTTAACTCTGTTGCCTGGGGACATTTCACAAGAAGACTTGGATTTGAAGGACTCCGTTCTACAGGAAGAAATTTACAATGGAATTGATGTTATAGTGAATTTAGCTGCAACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTTGGAACTAAGCATGTCTTGAGCTTTGCCAAAAAATGTGTTAAACTGAAGGTGCTTGTCCACGTTTCAACCGCATATGTATGTGGTGAAAGAGGAGGACTCATAGTAGAAGATCCATTACAATTGGGTGTGTCACTAAATGGAATACCCGGGCTAGACATTGATGTGGAAAAGAAAGTGGTGCAGGAGAAGTTGAAACAGCTTCAAGATGAAGGAGCCACAGAAGATGAAATTAAAATGGCCATGAAGGACTTGGGCATGAAAAGAGCAAGTGTATATGGATGGCCAAACACATATGTTTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACATTAAAGGAAAACATGTCTGTTGTTATTGTGCGTCCTACAATTGTTACCAGCACTTACAGAGAACCATTTCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTTTAATTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCTGATCTAAAGGCAGTTTTTGATGTGATACCAGCTGACATGGTAGTAAATGCAATACTTGCTGCAATGGTTGCTCATGCAAATCAGCCTTGTGATACAATATATCATGTGGGTTCCTCTGTTGCAAACCCAGTCAGATACCTCAATCTCCGAGACTACGGCTTCCGATATTTCATGGCAAAACCATGTCTTAACAAGGAAGGAATACCAATCAAAGTTGGCAAAGTTACAGTCTTGGACAACATGGCTAGCTTCCAAAGATATATGTTCATTCGCTACTTGCTTCCATTAAAGGGACTAGAGCTAGTGAATGCAGCATTCTGCCAGTATTTTCAGGGAATGTACCTTGACATCAATAGGAAGATCAATATTGTGATGCGGTTGGTTGAACTTTACAGGCCTTACATTTTCTTCAATGGCATATTTGATACTATGAACACAGAGAAGTTGCAGATAGCAGCAAGACAAGGTGGAGTAGAGATGGATTTGTTTTACTTTGATCCAAAAATGATTGATTGGGAGGACTACTTCTTGAATGTTCACATTCCTGGGATTGTTAAGTATGTTTTCAAGTGA 1473 0.3883 MELGSITQFLQDKNVLVVGATGFLAKIFVEKVLRVQPNVKKLYLLLRAKDTESATRRLQNEIIQKDLFRLLKENLGAKFNSFILEKLTLLPGDISQEDLDLKDSVLQEEIYNGIDVIVNLAATTNFDERYDVALGINTFGTKHVLSFAKKCVKLKVLVHVSTAYVCGERGGLIVEDPLQLGVSLNGIPGLDIDVEKKVVQEKLKQLQDEGATEDEIKMAMKDLGMKRASVYGWPNTYVFTKAMGEMLVGTLKENMSVVIVRPTIVTSTYREPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLKAVFDVIPADMVVNAILAAMVAHANQPCDTIYHVGSSVANPVRYLNLRDYGFRYFMAKPCLNKEGIPIKVGKVTVLDNMASFQRYMFIRYLLPLKGLELVNAAFCQYFQGMYLDINRKINIVMRLVELYRPYIFFNGIFDTMNTEKLQIAARQGGVEMDLFYFDPKMIDWEDYFLNVHIPGIVKYVFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1610 490 Pfam Male sterility protein 18 318 IPR013120 -
Lan8g1610 490 CDD FAR-N_SDR_e 13 361 - -
Lan8g1610 490 Pfam Male sterility protein 391 490 IPR033640 -
Lan8g1610 490 CDD FAR_C 390 489 IPR033640 -
Lan8g1610 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lan8g1610 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Lan8g1610 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Lan8g1610 490 Gene3D - 7 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1610 Lan-Chr8 23075031 23078699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1610 114 489 Acyl Lipid Metabolism Gene Families AT4G33790 62.234 2.91e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1610 K13356 - gmx:100793197 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1610 8 23075031 23078699 Lan13g0424 13 3035106 3038687 LSH