Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0424 ATGGAATTGGAAAGCATCACACAATTCCTTCATGACAAGAATGTTTTGGTCGTTGGTGCCACTGGCTTCCTTGCCAAAATTTTTGTGGAGAAGGTACTGAGAGTGCAACCAAATGTGAAGAAACTTTATCTCCTTTTGAGAGCCAAAGATGCTGAATCTGCCACACGACGATTGCAAAATGAGATTGTACGAAAGGATTTATTTAGATTGTTGAAGGAAAATCATGGTGCAAAATTCAATTCCTTTATCTCAAATAAGTTAACTTTAGTGCCCGGGGACATTTCACAAGAGGACTTGAATTTGAAGGACTCCGTTCTACAAGAAGAGATTTACAATGAAATTGATGTTATAGTTAATTTAGCAGCAACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTTGGAACTAAGCATGTCTTTAGCTTTGCCAAAAAATGCGTTAAACTGAAGGTGCTTGTCCACGTGTCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATAGTAGAAGATCCTACCGAACTTGGTGTGTCACTAAATGGAGTTCCCGGACTAGACATTGATGTGGAAAAGAAAGTGGTGCAAGAGAAGTTGAAACAGCTTCAAGATGAGGGAGCCACAGAAGATGAAATTAAAATGTCCATGAAGGACTTGGGCATGCAAAGAGCAAGTATATATGGATGGCCAAACACATACGTTTTTACAAAGGCAATGGGAGAAATGCTTGTGGGAACTATGAAGGAAAATATGTCAGTTGTTATTGTGCGTCCTACAATAGTTACAAGCACCTATAGAGAACCATTCCCTGGCTGGGTTGAAGGTGTAAGAACCATAGACAGTATCATTGTTGCTTATGGTAAAGGAAAATTAGCATGCTTCCTTGCGGATCTAAATGCAGTATTTGATGTGATACCAGCTGACATGGTAGTGAATGCAATGCTTGCTGCTATGGTGGCTCATGCTAATCACCCTAGTGACACAATATATCAAGTGGGTTCCTCTGTTTCAAATCCAATCAGATACCTCAATCTCCAAGACTATACCTACAGATATTTCATTGCAAAACCATGTCTTGACAAGGAAGGAATGCCTATCAAAGTTCGCAAAGTTACAGTGTTGGGTAACATGGCTAGCTTCCAAAGATATATGTACATTCGTTACTTGCTCCCATTAAAGGGGCTAGAGCTAGCAAATGCAGCATTTTGCCAATATTTTCAGGGAACATATCTTGATATCAGCAGAAAGATCAATATTGTGATGCGGTTGGTTGAACTTTACAGGCCTTACATTTTCTTCAATGGAATATTTGATACTATGAACACAGAAAAGTTGCAGATAGCAGCAAGACAAGGTGGAACAGAGATGGATTTGTTTTACTTTGACCCAAAAATTATTGATTGGGAGGACTACTTTTTGAATATTCACATTCCTGGTATTGTCAAATATGTCTTCAAGTGA 1473 0.3883 MELESITQFLHDKNVLVVGATGFLAKIFVEKVLRVQPNVKKLYLLLRAKDAESATRRLQNEIVRKDLFRLLKENHGAKFNSFISNKLTLVPGDISQEDLNLKDSVLQEEIYNEIDVIVNLAATTNFDERYDVALGINTFGTKHVFSFAKKCVKLKVLVHVSTAYVCGERGGLIVEDPTELGVSLNGVPGLDIDVEKKVVQEKLKQLQDEGATEDEIKMSMKDLGMQRASIYGWPNTYVFTKAMGEMLVGTMKENMSVVIVRPTIVTSTYREPFPGWVEGVRTIDSIIVAYGKGKLACFLADLNAVFDVIPADMVVNAMLAAMVAHANHPSDTIYQVGSSVSNPIRYLNLQDYTYRYFIAKPCLDKEGMPIKVRKVTVLGNMASFQRYMYIRYLLPLKGLELANAAFCQYFQGTYLDISRKINIVMRLVELYRPYIFFNGIFDTMNTEKLQIAARQGGTEMDLFYFDPKIIDWEDYFLNIHIPGIVKYVFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0424 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Lan13g0424 490 CDD FAR-N_SDR_e 13 361 - -
Lan13g0424 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lan13g0424 490 Gene3D - 6 370 - -
Lan13g0424 490 CDD FAR_C 390 489 IPR033640 -
Lan13g0424 490 Pfam Male sterility protein 392 490 IPR033640 -
Lan13g0424 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
Lan13g0424 490 Pfam Male sterility protein 18 318 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0424 Lan-Chr13 3035106 3038687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0424 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 59.524 1.29e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0424 K13356 - gmx:100793197 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1610 8 23075031 23078699 Lan13g0424 13 3035106 3038687 LSH