Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1609 ATGGAGTTGGGAAGCATACTCCACTTCCTTGAAGACAAGTCCATTTTAATTACTGGTGCCACTGGTTTTCTAGCCAAAATTTTGTTGGAGAAGATATTGAGGGTTCAGCCAAATGTTAAGAAGCTTTATCTTCTTTTAAGAGCTGCTGATACCAAATCTGCTACTCATCGCTTACACAATGAGATCATAGGGAAGGACTTATTTAGATTGCTAAAGGAAAAAGTAGGTCCAAATTTCAATTCCTTCCTTTCCGAAAAGTTGACACTCGTGCCTGGAGACATTTCTCGTCAAGACTTGGGTTTGGAAGATTTCATTCTAAGGGAAGAGATTTACAATCAAACAGATGTTATTATTAATTTAGCAGCTACCACTAACTTTGATGAAAGGTATGATATATCCTTGGGCCTAAATACCTTTGGAGTTAAGTATATAATCGACTTCGCCAAAAAATGTACCAAACTCAAAGTGCTTGTGCATGTCTCAACAGCTTATGTATGTGGTGAGGGAGAAGGACTAATATTAGAGAAGCCATATCATGTGGTTGATTCACTAAATGGAGTGCCTGGATTAGACATCGATGTAGAAGAGAAAGTGGTGCTTGACAAATTAGGTGAGTTACAAAAGCAGGGTGCCACAGAGAAGGAAATTAAAATGGTGATGAAGGACTTGGGTATTACCAGGGCAAAGAAGTATGGATGGCCAAACACATATGTATTTACAAAGGCAATGGGAGAAATGCTTGTGGAAAAACTGAGAGGAAACTTGTCTATTGTTATTGTTCGTCCTTCCATAGTTACTAGTACATTCAAAGAACCTTTCCCTGGTTGGGTTGAAGGTATAAGAACCATTGATAGTTTAGCTGTAGCTTATGGAAAAGGAAAACTAACATGCTTCCTTGGAGATCCCAATGCACTTATTGATGTGATACCAGCTGACATGGTGGTGAATGCAATGTTGGTGGCCATGGTAACTCATGCAAATTATCCTAGTAACACTATATATCATCTTACCTCCTCTGTTAGAAAACCAGTGAGATTTGGTGAATTACAAGACTATGGCTACGCATATTTCACTGCAAAACCATGGATCAACAAGGATGGAAAACCTGTCAAGGTTGGCAAATGTGTTGTCTTAAACAACATGGATAGCTTCCACAGATATATGTTCATTCGCTACATTCTTCTCTTAAAGGGACTTGGCCTGGCCAACACTGCATTTTGCCAGTACTTCAAGGGAACTTATCTTGATCTCAACAGAAAGATACAAATTGTGATGCGGTTGGTGGATCTTTACAAGCCTTACTTATTCTTCACGGGCGCATTTGATGATATGAACACTGAAAAGTTGCGGATTTCAGCAAGACAAGGTGGGGTGGAGACAGATTTGTTTTACTTTGATCCCAAAGTGATCAATTGGGATGATTACTTTTTGAACACCCATCTCCCTGGTGCAGTAAAGTACATTTTCAAGTGA 1473 0.3924 MELGSILHFLEDKSILITGATGFLAKILLEKILRVQPNVKKLYLLLRAADTKSATHRLHNEIIGKDLFRLLKEKVGPNFNSFLSEKLTLVPGDISRQDLGLEDFILREEIYNQTDVIINLAATTNFDERYDISLGLNTFGVKYIIDFAKKCTKLKVLVHVSTAYVCGEGEGLILEKPYHVVDSLNGVPGLDIDVEEKVVLDKLGELQKQGATEKEIKMVMKDLGITRAKKYGWPNTYVFTKAMGEMLVEKLRGNLSIVIVRPSIVTSTFKEPFPGWVEGIRTIDSLAVAYGKGKLTCFLGDPNALIDVIPADMVVNAMLVAMVTHANYPSNTIYHLTSSVRKPVRFGELQDYGYAYFTAKPWINKDGKPVKVGKCVVLNNMDSFHRYMFIRYILLLKGLGLANTAFCQYFKGTYLDLNRKIQIVMRLVDLYKPYLFFTGAFDDMNTEKLRISARQGGVETDLFYFDPKVINWDDYFLNTHLPGAVKYIFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1609 490 Gene3D - 8 370 - -
Lan8g1609 490 CDD FAR-N_SDR_e 13 361 - -
Lan8g1609 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Lan8g1609 490 CDD FAR_C 390 489 IPR033640 -
Lan8g1609 490 Pfam Male sterility protein 392 490 IPR033640 -
Lan8g1609 490 Pfam Male sterility protein 17 318 IPR013120 -
Lan8g1609 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Lan8g1609 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1609 Lan-Chr8 23064100 23069999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1609 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 60.317 4.53e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1609 K13356 - gmx:100798338 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1609 8 23064100 23069999 Lan13g0425 13 3047139 3053689 LSH