Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0425 ATGGAGTTGGGAAGCATAGTTCATTTCCTTCAGGACAAGTCCATTTTAATCACTGGTGCTACTGGCTTTCTTGCTAAAATTCTGTTGGAGAAGATATTGAGGGTTCAACCAAATGTTAAGAAGATGTATCTTCTTTTAAGAGCTCCAGATGCTAAATCTGCTACTCATCGCTTGCACAATGAGATCATAGGGAAGGACTTGTTTAAAGTGCTAAAGGAAAAATTGGGTGAAAACTTCAATTCCTTCATTTCCGAAAAGTTGACACTCGTGCCTGGAGACATTTCTCGTGAAAACTTGGGTTTGGAAGATTCCATTCTAAGGGAAGAGATTTACAATCAAACAGATGTTATTATTAATTTAGCTGCAACCACTAACTTTGATGAAAGGTATGATATATCGTTGGGCCTAAATACCTTTGGAGTTAAGTATACAATTGACTTCGCCAAAAAATGTACTAAACTCAAGGTGCTTATGCATGTCTCAACAGCATATGTATGTGGTGAGGGAGAAGGATTGATATTAGAGAAGCCATATCATTTGGGCAATTCACTAAATGGTGTATCTGGATTAGACATTGATGAAGAAGAAAAAGTGGTGCATGACAAGTTAGGTGAGCTACAACAAAAGGGTGCCACAGAGAATGAAATTAAAAAGGCCATGAAGGATTTGGGTATTACCAGGGCAAATAAGTATGGATGGCCAAACACATACGTATTTACAAAGGCAATGGGAGAAATGCTTGTGGAAGAATTGAGAGGAAACTTGTCTATTGTTATTGTTCGTCCTTCCATTGTTACTAGTACATTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGCATAAGAACCATTGACAGTTTAGCTGTAGCTTATGGAAAAGGAAAACTAACATGCTTCCTTGGAGATCCTAAGGCACTTATTGATGCGATACCAGCTGATATGGTGGTGAATGCAATGCTAGTAGCTATGGTGACTCATGCAAATCATCCTAGTGACACTATATATCATGTTAGTTCCTCAGTTAGAAAACCACTTAGATATGGCGACATACAAGACTATGGCTACACATATTTCACGGCAAAACCATGGATCAATAAGGATGGAAAGCCTGTTAAGGTTGGCAAATGTGTTGTCTTGAAAAACATGGATAGCTTTCGCAGATACATGTTCATTCGCTATGTTCTTCTTTTAAAGGGACTAGAGTTGGCCAACACTGCATTTTGTCAATACTTCAAGGGAACGTATCTTGATCTCAACAGAAAGATCCAGATTGTGATGCGGTTGGTGGAGCTTTACAAGCCTTACTTGTTTTTCAAGGGCGCATTTGATGATATGAATACAGAAAAGTTGCGAATGGCAGCAAGACAAGGTGGGGTGGAGACAGATTTGTTTTACTTTGACCCTAAAGTGATCAATTGGGATGATTACTTTTTGAACACCCATCTTCCTGGTGCAGCAAAGTACATTTACAAGTGA 1473 0.3904 MELGSIVHFLQDKSILITGATGFLAKILLEKILRVQPNVKKMYLLLRAPDAKSATHRLHNEIIGKDLFKVLKEKLGENFNSFISEKLTLVPGDISRENLGLEDSILREEIYNQTDVIINLAATTNFDERYDISLGLNTFGVKYTIDFAKKCTKLKVLMHVSTAYVCGEGEGLILEKPYHLGNSLNGVSGLDIDEEEKVVHDKLGELQQKGATENEIKKAMKDLGITRANKYGWPNTYVFTKAMGEMLVEELRGNLSIVIVRPSIVTSTFKEPFPGWAEGIRTIDSLAVAYGKGKLTCFLGDPKALIDAIPADMVVNAMLVAMVTHANHPSDTIYHVSSSVRKPLRYGDIQDYGYTYFTAKPWINKDGKPVKVGKCVVLKNMDSFRRYMFIRYVLLLKGLELANTAFCQYFKGTYLDLNRKIQIVMRLVELYKPYLFFKGAFDDMNTEKLRMAARQGGVETDLFYFDPKVINWDDYFLNTHLPGAAKYIYK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0425 490 CDD FAR-N_SDR_e 13 361 - -
Lan13g0425 490 Gene3D - 8 371 - -
Lan13g0425 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Lan13g0425 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lan13g0425 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
Lan13g0425 490 CDD FAR_C 390 488 IPR033640 -
Lan13g0425 490 Pfam Male sterility protein 17 318 IPR013120 -
Lan13g0425 490 Pfam Male sterility protein 392 490 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0425 Lan-Chr13 3047139 3053689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0425 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 59.524 5.70e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0425 K13356 - gmx:100798338 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1609 8 23064100 23069999 Lan13g0425 13 3047139 3053689 LSH