Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1592 ATGAGAGAGGAGGAAAAAGAGGTGTCCCTTTTGGCCATTCTTGTGACCCTTTTCAGGAAATCATTGATGGCTTGTAACAGTGTTGATAGGAGGGAGCTATGTGCTATGGAGATTGGACTGCCCACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGATTCAATGGCTTCTTAGGTTTGCCTGTTGAGTTTGAACCTGAAGTACCCAGAAGGCCCCCCAGTGCTAGTGCTACTGTTTTTGGAGTTTCAACTGAATCCATGCAATTATCATATGAGACAAGAGGGAACAGTGTTCCAACAATTCTGTTACTAATGCAAAGGCGCTTGTATGATCAAGGAGGATTACAGGCAGAAGGGATTTTCAGAATTAATGCAGACAATAGTAAAGACCAATACTATAGGGAACAATTAAATAGGGGATTGGTCCCAGATGACATTGATGTACATTCTTTGGCAGGACTAATTAAGGCTTGGTTTAGGGAAATGCCTGTAAGTGTTCTGGATTCTTTATCACCAGAGCAGGTAATGCAATCCCAAATTGAAGAGGATTGTGCTGAACTAGCAAGGCAACTACCTCACACTGAAGCTTCCCTTCTGAACTGGGCTATCAATCTGATGGCTGATGTTGTCCAACACGAACATCTGAATAAGATGAATGCACACAACATTGCCATGGTTTTCGCACCAAACATGGCCCAGATGGAAGACCCGATGAGCGCATTGATGTATGCAGTTCAAGTAATGAACTTTTTGAAGACACTGATATTAAGGACACTACGGGAAAGAAAGGATTCTGTTGTAGAAACATCTCCTGGATTTTGCTTACAGCCTTCTGATGACAATGAGGACCATAATGACATATTTTACTCCTTCGAACAAGATGCAACTACAGAAAATGAAGAGGCTGTGGAAACCTTTGTTTATGAGAAAGATGTATTAGAATGTTCCCTTCAATCCCTCCAAAACATAAACTCAACTGAAGCAAAATGTAGCAGTTTGGTGAGGTCCTCCTATGAGAATCTAATATGGAATGAAGATTTCTGTTTTTGGTTTCCACCCAAAGGAAAGGTTGGGAAGAAGAGTGGCCAACCAGGGAGTTCAAGTACTAAAAATGTGTTACAGAAAAACAAAGTCCAACAACCTATAATCAATGGAACAATGACTGGAAAATGGTTTAGCAATCTGAGCCGAATAGATTCAAGATCAGAGAGGATAGAAGCCTGGTGGTGA 1233 0.4152 MREEEKEVSLLAILVTLFRKSLMACNSVDRRELCAMEIGLPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYETRGNSVPTILLLMQRRLYDQGGLQAEGIFRINADNSKDQYYREQLNRGLVPDDIDVHSLAGLIKAWFREMPVSVLDSLSPEQVMQSQIEEDCAELARQLPHTEASLLNWAINLMADVVQHEHLNKMNAHNIAMVFAPNMAQMEDPMSALMYAVQVMNFLKTLILRTLRERKDSVVETSPGFCLQPSDDNEDHNDIFYSFEQDATTENEEAVETFVYEKDVLECSLQSLQNINSTEAKCSSLVRSSYENLIWNEDFCFWFPPKGKVGKKSGQPGSSSTKNVLQKNKVQQPIINGTMTGKWFSNLSRIDSRSERIEAWW* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1592 410 SMART PBD_5 38 72 IPR000095 -
Lan8g1592 410 Pfam RhoGAP domain 100 234 IPR000198 GO:0007165
Lan8g1592 410 PANTHER MKIAA1688 PROTEIN 2 337 IPR044785 GO:0005096
Lan8g1592 410 Pfam P21-Rho-binding domain 37 63 IPR000095 -
Lan8g1592 410 ProSiteProfiles CRIB domain profile. 38 51 IPR000095 -
Lan8g1592 410 CDD CRIB 36 76 - -
Lan8g1592 410 CDD RhoGAP 100 256 - -
Lan8g1592 410 SUPERFAMILY GTPase activation domain, GAP 78 257 IPR008936 GO:0007165
Lan8g1592 410 Gene3D Rho GTPase activation protein 71 267 IPR008936 GO:0007165
Lan8g1592 410 Gene3D CRIB domain 34 67 IPR036936 -
Lan8g1592 410 SMART RhoGAP_3 97 260 IPR000198 GO:0007165
Lan8g1592 410 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 2 337 - -
Lan8g1592 410 ProSiteProfiles Rho GTPase-activating proteins domain profile. 88 268 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1592 Lan-Chr8 22916838 22919839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1592 - K20642 ccaj:109798318 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0368 7 2522219 2524141 Lan8g1592 8 22916838 22919839 LSH
Lan6g1844 6 29655516 29658199 Lan8g1592 8 22916838 22919839 PCT
Lan8g1592 8 22916838 22919839 Lan6g1844 6 29655516 29658199 PCT