Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1844 ATGACCAAACTCTTCCATTCTTCATCCTCAAGCACCACAGACCAAACCAACAACATTAACAACAACAACAACAACCTCTTCTTCATACTTCTCTTCATTATTCTTTCCTTCTTCCTCCTTACCCTTCTCACCAAATTAATCCTCCGTTGGTTGTTGTTTCCCATGGACATAGGCTTCCCAACTAACGTGCGCCACGTTGCGCATGTCACCTTTGATAGGTTCAATGGCTTCCTTGGTTTGCCTGCTGAGTTTGAACCTGACATGCCCACAAGGCCTCCTAGTGCTAGTGCAACTGTGTTTGGAGTTTCAACAGAATCCATGCAGTTGTCATTTGACTCAAGAGGTAACAGTGTGCCAACTATTTTGTTGCTAATGCAAACTCATTTGTATGCTCAAGAGGGGTTGCAGGCAGAGGGGATTTTCAGAATTAACGCGGACAATAGTCACGAGGAATATGTTAGGGATCAATTGAATCTGGGATCGGTCCCGGATGGCATTGATGTGCATTGTTTGGCAGGACAAATTAAGGCTTGGTTTAGGGAACTTCCTATGGGTGTTCTGGATCCGTTATCACAAGAGCAGGTAATGCAATGCCAGAGTGAAGAGGAATGTGTTGAACTAGTGAAGCATCTACCTAACACTGAAGCCGCCCTACTCGACTGGGCCATCAATCTCATGGCTGATGTTGTTGAGCACCAACATCTGAATAAGATGAATGCACACAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTTCACTGCATTGGTGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTATAACAAGAACACTGCAGGAAAGAAAGGATTCTGTGGTAGAATCATCTCTTACACTTTATTTACAGCCTTTGGTCGAGAACGCGAGCCATAGCATCTTGGAGTCCTGCAAGCAAGGTACTGCTGCAGAAAATGAAGATGCTGATGAAAACATTGTTGCTAAGGATACTGCCTTAGATAATAACTCCTCAATTGGAGGAGAAAGTAAGAGTTTGATAAGCTCTTATTGTGAGTGTCCACCTAAAGGAAACATGGCAAAGAGTAAGACAGTCCAATCAAGTAGTTCAAGTTCTATAAAAGGATCTCAGAAAACAAGAAATCAGAAACCTGTTGAGAAAATTGGAATTAGGAGTTTAGATTCAAAAGAAGAAAAGGAGTGTAAATTGATTATATGA 1215 0.4222 MTKLFHSSSSSTTDQTNNINNNNNNLFFILLFIILSFFLLTLLTKLILRWLLFPMDIGFPTNVRHVAHVTFDRFNGFLGLPAEFEPDMPTRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQTHLYAQEGLQAEGIFRINADNSHEEYVRDQLNLGSVPDGIDVHCLAGQIKAWFRELPMGVLDPLSQEQVMQCQSEEECVELVKHLPNTEAALLDWAINLMADVVEHQHLNKMNAHNIAMVFAPNMTQMADPFTALVYAVQVMNFLKTLITRTLQERKDSVVESSLTLYLQPLVENASHSILESCKQGTAAENEDADENIVAKDTALDNNSSIGGESKSLISSYCECPPKGNMAKSKTVQSSSSSSIKGSQKTRNQKPVEKIGIRSLDSKEEKECKLII* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1844 404 MobiDBLite consensus disorder prediction 357 390 - -
Lan6g1844 404 SMART RhoGAP_3 116 279 IPR000198 GO:0007165
Lan6g1844 404 CDD RhoGAP 119 276 - -
Lan6g1844 404 Pfam P21-Rho-binding domain 56 88 IPR000095 -
Lan6g1844 404 SUPERFAMILY GTPase activation domain, GAP 97 276 IPR008936 GO:0007165
Lan6g1844 404 MobiDBLite consensus disorder prediction 359 378 - -
Lan6g1844 404 ProSiteProfiles Rho GTPase-activating proteins domain profile. 102 287 IPR000198 GO:0007165
Lan6g1844 404 CDD CRIB 55 98 - -
Lan6g1844 404 PANTHER MKIAA1688 PROTEIN 15 365 IPR044785 GO:0005096
Lan6g1844 404 ProSiteProfiles CRIB domain profile. 57 70 IPR000095 -
Lan6g1844 404 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 15 365 - -
Lan6g1844 404 Gene3D Rho GTPase activation protein 90 288 IPR008936 GO:0007165
Lan6g1844 404 Gene3D CRIB domain 54 88 IPR036936 -
Lan6g1844 404 SMART PBD_5 57 91 IPR000095 -
Lan6g1844 404 Pfam RhoGAP domain 119 253 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1844 Lan-Chr6 29655516 29658199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1844 - K20642 lang:109350806 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1844 6 29655516 29658199 Lan7g0368 7 2522219 2524141 PCT
Lan6g1844 6 29655516 29658199 Lan8g1592 8 22916838 22919839 PCT
Lan7g0368 7 2522219 2524141 Lan6g1844 6 29655516 29658199 PCT
Lan8g1592 8 22916838 22919839 Lan6g1844 6 29655516 29658199 PCT