Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1572 ATGGGAAAGAACCAGAAAACAGGACTGGGTAGGTCCCTGGTTAAACAACACAACCATATGATCCAAGAAACAAAGGAGAAAGGTCGTATCTACAAGAAGAACTTTCTAGAATCATTCACCCAAGTTACTGACATCGACACAATCATCGAACAATCTGAAAACCCCCAACTTCATTCAGATTCCGATGCCGACGATCCTCATCTCACCCTCCTCCCACCTACCCTTCGCATCAATCTGGATCCAGGATCTGGGTCTATTGGTATGACGCCTGAAGAGATGAGGAAGCAGCAGAGGAGGGAGGAGGCATTACATGCTAGCAGTCTGCGAGTTCCACGCAGGCCCCCGTGGACTGCAAATATGTCTGTGGAGAAGCTTGATGCTAATGAAAGACAATCTTTCTTGACTTGGCGTCGCAACCTAGCAAGGCTTGAGGAAAATAAGACGCTTGTCCTTACTCCATTTGAGAAAAATATTGATATCTGGAGACAGCTCTGGCGGGTTGTGGAGCGCAGTGATTTGCTTGTTATGGTTGTTGATTCACGAGATCCTCTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCATGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGAATCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTACTGCAGCTCTAGAAGGCAAGAAGCTTGGTTCATCATGGGAGGCTGATAACGTGGGGAGAACAAATAACCTAGACACAAAGATATATGGAAGGGATGAGCTTTTAGCCCGCTTGCAATCAGAGGCAGAAGAGATAGTTGAAAGGAGGAGAAATTCGGGCTCCTCTGGCACAAGGCATTCTAAGGTTAAATCTCCTGATGAAAATGCTGCTGGTAGTTCGTCATCAAGTAATGTAATTGTGGGATTTGTTGGATATCCTAATGTTGGGAAAAGCTCAACTATTAATGCTCTGGTTGGTCAAAAGCGGACTGGTGTCACCTCTACTCCAGGGAAAACAAAGCATTTCCAGACATTAATTATTTCTGACAGGCTCACCCTTTGTGACTGCCCGGGATTAGTTTTTCCATCTTTTTCAAGCTCAAGATATGAGATGATTGCTTCTGGAGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTATCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATCGAAGCGACTTATAAGATCAAACTTCCTAAACCTAAACCATATGAGTCCCAATCTCGTCCCCCTCTGGCATCTGAACTTCTGAGAGCATATTGTGCTTCTCGTGGGCATGTTGCCTCCAGCGGACTTCCTGATGAAACCAGGGCTTCTCGTCAGATTCTGAAAGATTACATTGACGGGAAGCTGCCTCACTATGCGATGCCCCCTGCCACGTCGAATGAGGAACTTGCTGTAGAAGATCCTGCAGGGCATGACTCCTCAGATAAGTTGCACGAGCCAGATTCATCTGGTATTGAAGATTCCTCAGATGTTGAGAATGAAGTTGCACCATCTAATCTTGAACATGTATTGGATGACCTCAATTCATTTGACATGGCTAATGGACTTGCTGCTTCGAAGAAAGTTACTATCAAGAAGTCCAAGGAGTCTCAAAAACAACATAGAAAGCCTCAGAGGAAAAAAGATCGCACATGGAGAGCAGGGAATGATGGTGATGATGGAACACCGATTGCGAGAGTCTTTCAGAAACCAGTAAATACAGGTCCTTCGAAGGTCTGA 1800 0.4489 MGKNQKTGLGRSLVKQHNHMIQETKEKGRIYKKNFLESFTQVTDIDTIIEQSENPQLHSDSDADDPHLTLLPPTLRINLDPGSGSIGMTPEEMRKQQRREEALHASSLRVPRRPPWTANMSVEKLDANERQSFLTWRRNLARLEENKTLVLTPFEKNIDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAWEVDEHKRTLLLVNKADLLPESIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEADNVGRTNNLDTKIYGRDELLARLQSEAEEIVERRRNSGSSGTRHSKVKSPDENAAGSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHRESIQVVADRVPRHVIEATYKIKLPKPKPYESQSRPPLASELLRAYCASRGHVASSGLPDETRASRQILKDYIDGKLPHYAMPPATSNEELAVEDPAGHDSSDKLHEPDSSGIEDSSDVENEVAPSNLEHVLDDLNSFDMANGLAASKKVTIKKSKESQKQHRKPQRKKDRTWRAGNDGDDGTPIARVFQKPVNTGPSKV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1572 599 Pfam 50S ribosome-binding GTPase 321 387 IPR006073 GO:0005525
Lan8g1572 599 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 568 IPR043358 GO:0003924
Lan8g1572 599 PANTHER GTPASE LSG1-1 1 568 - -
Lan8g1572 599 MobiDBLite consensus disorder prediction 548 599 - -
Lan8g1572 599 MobiDBLite consensus disorder prediction 287 306 - -
Lan8g1572 599 MobiDBLite consensus disorder prediction 554 569 - -
Lan8g1572 599 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 161 376 IPR030378 GO:0005525
Lan8g1572 599 MobiDBLite consensus disorder prediction 55 84 - -
Lan8g1572 599 MobiDBLite consensus disorder prediction 493 512 - -
Lan8g1572 599 MobiDBLite consensus disorder prediction 287 315 - -
Lan8g1572 599 PRINTS GTP1/OBG GTP-binding protein family signature 321 341 IPR006073 GO:0005525
Lan8g1572 599 PRINTS GTP1/OBG GTP-binding protein family signature 367 382 IPR006073 GO:0005525
Lan8g1572 599 Gene3D - 160 377 IPR027417 -
Lan8g1572 599 MobiDBLite consensus disorder prediction 493 520 - -
Lan8g1572 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 451 IPR027417 -
Lan8g1572 599 CDD HSR1_MMR1 160 376 - -
Lan8g1572 599 Gene3D - 381 482 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1572 Lan-Chr8 22733616 22737336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1572 K14539 - gmx:100817523 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0401 7 2785552 2801919 Lan8g1572 8 22733616 22737336 LSH