LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan7g0401	ATGGGAAAGAACCAGAAGATAGGGTTAGGGAGATCCCTTGTTAAGCAACACAATCATATGGTTCAACAAACCAAAGAAAAGGGTCGTATCTACAAGAAGAAGTTTCTAGAATCATTCACTGAAGTTACTGACATCGACGCCATCATTGAAAAATCGGAAAATCCCGACGCCGACTCCGACTCCGACTCCGATGCCGATGCCGATGTTCCTTATCTTCCCGCCGCACCGCCTACCCTTCGCATCAGTATGGATCCAAGGTCTGAGTCTGCTGACATGACGCCTGAAGAGATGAAGATGCAGCAGAAGAGGGAGGAGGCACTGCATGCTAGCAGTCTCCGAGTTCCACGCAGGCCACCGTGGACTACAGACATGTCTGTGGATGAGCTTGATGCTAATGAAAGACAATCTTTCTTGACTTGGCGTCGCAGCCTAGCTAGGCTTGAGGAAAATAAGACGCTTGTGCTTACTCCATTTGAGAAAAATATTGATATCTGGAGACAGCTCTGGCGTGTTGTTGAGCGCAGTGATTTGCTTGTTATGGTCGTTGATTCACGTGATCCTTTGTTCTATCGCTGTCCCGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAACGCACATTGCTTTTGGTTAACAAGGCAGATCTGTTACCTACTTCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATTTTCTGGTCAGCTAAAGCTGCTACTGCAGTTCTGGAAGGCAAGAAGCTTGGTTCATCGTGGGAGGCTGATAACATGGGGGGAACTAATAACCCAGACACGATGATTTATGGAAGGGATGAGCTTCTGGCTCGCTTGCAATCAGAGGCAGAAGAGATAGTTGAGAGGAGGAGAAATTCAGGCTCCTCTGACACAGGACCATCCAATGTTAAATCTTCTGGTGAAAATGCTGCTGGTAGTTCGTCGTCAGGTAATGTAATTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATCAATGCTCTGGTTGGTCAAAAAAGGACCGGTGTTACCTCTACTCCAGGGAAAACAAAGCACTTCCAGACATTAATTATTTCGGAAAAACTGACCCTTTGTGACTGCCCTGGATTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTGCTTGTGGAGTGTTGCCTATTGATAGGATGACTGAACATAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTTCCAAGACATGTCATCGAGGCGACTTATAAGATCAAACTTCCTAGACCTAAGTCATATGAGTCCCAAGTCCGCCCCCCATTGGCATCTGAACTTATGAGATCGTATTGTGCTTCCCGTGGGTATGTTGCTTCTAGTGGACTTCCCGACGAAACTAGGGCTTCCCGTCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGCAATGCCCCCTGGCGTGTCAAACGAGGAACTCACTGTAGAGGATCCTGAAGGACCTGACTCAGATAACTTGCAGGAGCCAGATTCATCCGGTACTGAAGATTCTTCAGATGTTGAGAATGAAACTGCACCAGCAAATCTTGAACACTTATTGGATGACCTCAATTCATTTGACATGGCTAATGCACTTGCTACTTCAAAGAAAAGTAGTGTTAAGAAGTCCAAGGAATCTCAGAAACATCATAAAAAGCCTCAGAGGAAGAAAGATCGTACGTGGAGGGCAGGGAATGATGGTGGTGATGGAACGCCGATTGCAAGAGTCTTTCAGAAACCAGTAAACACAGGTCCCTCTAAGGTCTGA	1809	0.4561	MGKNQKIGLGRSLVKQHNHMVQQTKEKGRIYKKKFLESFTEVTDIDAIIEKSENPDADSDSDSDADADVPYLPAAPPTLRISMDPRSESADMTPEEMKMQQKREEALHASSLRVPRRPPWTTDMSVDELDANERQSFLTWRRSLARLEENKTLVLTPFEKNIDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTSIREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGSSWEADNMGGTNNPDTMIYGRDELLARLQSEAEEIVERRRNSGSSDTGPSNVKSSGENAAGSSSSGNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRMTEHRESVQVVADRVPRHVIEATYKIKLPRPKSYESQVRPPLASELMRSYCASRGYVASSGLPDETRASRQILKDYIDGKLPHYAMPPGVSNEELTVEDPEGPDSDNLQEPDSSGTEDSSDVENETAPANLEHLLDDLNSFDMANALATSKKSSVKKSKESQKHHKKPQRKKDRTWRAGNDGGDGTPIARVFQKPVNTGPSKV*	603

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	483	524	-	-
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	1	25	-	-
	Lan7g0401	602	PANTHER	GTPASE LSG1-1	1	570	-	-
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	50	94	-	-
	Lan7g0401	602	PRINTS	GTP1/OBG GTP-binding protein family signature	325	345	IPR006073	GO:0005525
	Lan7g0401	602	PRINTS	GTP1/OBG GTP-binding protein family signature	371	386	IPR006073	GO:0005525
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	297	318	-	-
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	556	572	-	-
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	290	318	-	-
	Lan7g0401	602	Gene3D	-	164	381	IPR027417	-
	Lan7g0401	602	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	163	433	IPR027417	-
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	544	602	-	-
	Lan7g0401	602	Pfam	50S ribosome-binding GTPase	325	381	IPR006073	GO:0005525
	Lan7g0401	602	Gene3D	-	383	486	IPR023179	-
	Lan7g0401	602	PANTHER	LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED	1	570	IPR043358	GO:0003924
	Lan7g0401	602	CDD	HSR1_MMR1	164	380	-	-
	Lan7g0401	602	ProSiteProfiles	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile.	165	380	IPR030378	GO:0005525
	Lan7g0401	602	MobiDBLite	consensus disorder prediction	506	524	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan7g0401	Lan-Chr7	2785552	2801919	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan7g0401	K14539		-	gmx:100817523	913.294

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0401	7	2785552	2801919	Lan7g0401	7	2785552	2801919	ECH
	Lan7g0401	7	2785552	2801919	Lan8g1572	8	22733616	22737336	LSH