Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1564 ATGGCCATGGATGCCATTACCATCATCCATGCCATCTTCACCATTCTCTTCTTCCTTCCCATTACCACATTCTCAATCTCATCATTGTCTCAGTCTCAGTCTCAGATCAACTCTAACTCTATCCTTGTTGCTCTGTTAGACTCTCATTACACTGAACTCGCTGAGCTTGTAGAAAAGGCCATGCTGCTTCAGAAACTTGAAGACACTGTTTCAGCTCACAATATTACCATTTTCGCCCCCAAAAATCAAGCTTTTTTTGACCCAGATTTCAAGCGTTTCCTTCTAGAACCTCGAAATCTGAATTCCCTCCAAACTCTTCTCATGTCACATATAATCCCGACCCGAATCGGATCCAAAACCGGGTCAGCCCGACACCGCACTCTCGCCGGCGATCACCACCATCTCCGCCTTCAAACCAATTCCACAACCACCGACACTCAGTGGACTGTCGACGGCGCTTGTATTACACACCCCGACGCCGTGACTCGACCCGACGGAGTTATCCACGGCATTGACCACCTCCTTGTCCCACGCTCCGTCCAAGACGACTTCAACCGCCGCCGTAGCCTACGGTCAATATCCGCCGTGAAACCCGAAGGAGCACCTGAAGTGGACCCGAGAACCCACCGCCTCAAGAAACCAGTCCCACCGTCAAACCCCGGTTCTCAACCGGCGCTACCAATCTCTGACGCATTAGCACCAGGGCCAGCAATATCTCCGGCACCTGCGCCGGGTCCCGGAGGGCCTCACCACCATTTCAACGGCGAAGCTCAGGTGAAGGATTTCATCCAAACCCTACTCCATTACGGCGGTTACAACGAGATGGCGGACATTCTCGTAAACCTGACATCACTCGCCACCGAGATGGGGCGGTTAGTATCGGAGGGTTACGTTTTAACGGTTCTGGCTCCTAACGATGAAGCAATGGCCAAATTAACAACAGACCAATTGAGTGAACCGGGTTCACCCGAACAAATCATGTATTACCATCTCATACCGGAGTATCAAACCGAAGAGAGCATGTATAATTCTGTTAGAAGGTTCGGGAAGGTTCATTATGATACACTCCGTGTGCCACATAAGGTGGTAGCTCAGGAGGCTGATGGGTCGGTTAAATTCGGAGACGGTGATGGTTCGGCTTATTTATTCGACCCGGATATTTATACCGACGGCCGGATCTCTGTTCAGGGGATTGATGGGGTGTTGCTTCCTTTAGAGGAGGTGAAGGATGTGACCCGGGTTAAAACGGGTCAACCCGCTAAGGTTGTGGTCAAGCAGAGAAGAGGAAAATTGATGGAAGCAACATGCTGGATGCTAGGAACCATTGGACAGCATTCTAGCTTCACCTCTTGCCAATAA 1359 0.5063 MAMDAITIIHAIFTILFFLPITTFSISSLSQSQSQINSNSILVALLDSHYTELAELVEKAMLLQKLEDTVSAHNITIFAPKNQAFFDPDFKRFLLEPRNLNSLQTLLMSHIIPTRIGSKTGSARHRTLAGDHHHLRLQTNSTTTDTQWTVDGACITHPDAVTRPDGVIHGIDHLLVPRSVQDDFNRRRSLRSISAVKPEGAPEVDPRTHRLKKPVPPSNPGSQPALPISDALAPGPAISPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNSVRRFGKVHYDTLRVPHKVVAQEADGSVKFGDGDGSAYLFDPDIYTDGRISVQGIDGVLLPLEEVKDVTRVKTGQPAKVVVKQRRGKLMEATCWMLGTIGQHSSFTSCQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1564 452 MobiDBLite consensus disorder prediction 191 254 - -
Lan8g1564 452 SUPERFAMILY FAS1 domain 238 405 IPR036378 -
Lan8g1564 452 Gene3D FAS1 domain 23 178 IPR036378 -
Lan8g1564 452 Gene3D FAS1 domain 251 404 IPR036378 -
Lan8g1564 452 SMART fasc_3 300 405 IPR000782 -
Lan8g1564 452 SMART fasc_3 76 178 IPR000782 -
Lan8g1564 452 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 11 452 IPR044654 -
Lan8g1564 452 ProSiteProfiles FAS1/BIgH3 domain profile. 259 387 IPR000782 -
Lan8g1564 452 SUPERFAMILY FAS1 domain 39 178 IPR036378 -
Lan8g1564 452 ProSiteProfiles FAS1/BIgH3 domain profile. 37 175 IPR000782 -
Lan8g1564 452 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 11 452 - -
Lan8g1564 452 Pfam Fasciclin domain 49 177 IPR000782 -
Lan8g1564 452 Pfam Fasciclin domain 284 404 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1564 Lan-Chr8 22672877 22677025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1564 - - adu:107477699 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0408 7 2876813 2880567 Lan8g1564 8 22672877 22677025 LSH