Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0408 ATGGCTATGAATGTGATCTTCATCATTCTCCTTCTTCTCCCTATCAACACATTCTCAATGCCTCAGTCTCAGATAAACTCTAACTCCATCCTCGTTGCTCTATTGGACTCTCATTACACTGAACTCGCTGAACTTGTCGAGAAAGCCATGCTTCTTCACAAACTTGAAGACACTGTTTCTATTCACAATATTACCATTTTTGCACCCAAAAATGAAGCTTTTCTTGACCCAGATTTCAAGCTCTTCCTTCTCCAACCTCGAAATCTTATTTCCCTCCAAACCCTTCTTATGTCACATATCATTCCAACCCGAATCGCTTCCAAAACAGGGTCCACCCGCCACCGCACCCTTGCCGGTGACCACCACCATATCAGTCTCCAAGCCAATTCCTCAGCCGCCACGACACAATGGACTGTCGACGGCGCGTGTGTTACACACCCCGACGCCGTGACCCGACCCGACGGTGTAATCCACGGCATTGACCAGCTCCTAGTTCCACGCTCCGTCCAAGACGACTTCAACCGCCGCCGGAGCCTCCGTTCAATCTCCGCCGTGAAACCCGAAGGAGCACCGGAAGTAGACCCAAGAACCAACCGCCTCAAGAAACCAGCCCCTCCGTCAAAACTAGGTTCTCCTCCGGCGCTACCAATCTCCGACGCATTAGCACCAGGACCATCAATCTCCCCAGCTCCGGCACCGGGTCCCGGAGGACCTCACCACCACTTCAACGGCGAGGCTCAGGTGAAGGGTTTCATTCAAACCCTACTCCAATACGGTGGTTATAACGAAATGGCGGACATTCTAGTAAACCTTACATCACTCGCCACCGAAATGGGTCGGTTAGTATCGGAGGGTTATGTTTTAACGGTTCTAGCTCCGAACGATGAAGCAATGGCGAAATTAACAACAGACCAATTAAGTGAACCGGGTTCACCGGAACAGATCATGTATTATCATCTCATACCGGAGTATCAAACCGAAGAGAGTATGTATAATTCAGTTAGAAGGTTCGGGAAGGTTCAGTATGACACACTTCGTGTGCCACATAAGGTGGTGGCTGAAGAATCTGATGGGTCGGTTAAGTTTGGGAATGGTGATGGGTCGGCTTATTTGTTCGACCCGGATATTTATACCGATGGCCGGATCTCTGTTCAGGGAATTGATGGGGTTTTGTTTCCTTTGGAGGAGGAAGAGGATTCGAATCGGGTTAAACCGGGTCAACCCGCTAAGGTTGTGACTGTCAAGCAGAGAAGAGGAAAATTGCTAGAAGCGACATGCTGGATGCTAGGAACCATTGGACAGCATTCTAGATTCACCTCTTGCCAATAA 1329 0.4936 MAMNVIFIILLLLPINTFSMPQSQINSNSILVALLDSHYTELAELVEKAMLLHKLEDTVSIHNITIFAPKNEAFLDPDFKLFLLQPRNLISLQTLLMSHIIPTRIASKTGSTRHRTLAGDHHHISLQANSSAATTQWTVDGACVTHPDAVTRPDGVIHGIDQLLVPRSVQDDFNRRRSLRSISAVKPEGAPEVDPRTNRLKKPAPPSKLGSPPALPISDALAPGPSISPAPAPGPGGPHHHFNGEAQVKGFIQTLLQYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNSVRRFGKVQYDTLRVPHKVVAEESDGSVKFGNGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEEEDSNRVKPGQPAKVVTVKQRRGKLLEATCWMLGTIGQHSRFTSCQ* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0408 442 Pfam Fasciclin domain 38 166 IPR000782 -
Lan7g0408 442 Pfam Fasciclin domain 273 393 IPR000782 -
Lan7g0408 442 SMART fasc_3 289 394 IPR000782 -
Lan7g0408 442 SMART fasc_3 65 167 IPR000782 -
Lan7g0408 442 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 442 - -
Lan7g0408 442 ProSiteProfiles FAS1/BIgH3 domain profile. 26 164 IPR000782 -
Lan7g0408 442 SUPERFAMILY FAS1 domain 227 394 IPR036378 -
Lan7g0408 442 SUPERFAMILY FAS1 domain 28 167 IPR036378 -
Lan7g0408 442 MobiDBLite consensus disorder prediction 180 244 - -
Lan7g0408 442 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 442 IPR044654 -
Lan7g0408 442 ProSiteProfiles FAS1/BIgH3 domain profile. 248 376 IPR000782 -
Lan7g0408 442 Gene3D FAS1 domain 242 393 IPR036378 -
Lan7g0408 442 Gene3D FAS1 domain 17 167 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0408 Lan-Chr7 2876813 2880567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0408 - - adu:107477699 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0408 7 2876813 2880567 Lan8g1564 8 22672877 22677025 LSH