Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1551 ATGGCTAAGAACTCCTTCAAGATGGAACAACCACTCGAAAGGAGGCAGGCTGAAGCAGCTCGCATACGCGAGAAGTATCCGGATAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGACTGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGCCAGTTTGTGTATGTGGTACGGAAGAGAATCAAACTGAGTGCTGAAAAGGCCATCTTCATTTTCGTCAAGAACATTTTACCACCAACTGCGGCTATGATGTCGGCAATCTATGAGGAAAATAAGGATGAAGATGGATTCCTGTACATGACCTACAGTGGGGAGAACACATTTGGGATGATGATCTGA 363 0.438 MAKNSFKMEQPLERRQAEAARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGMMI* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1551 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Lan8g1551 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Lan8g1551 120 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
Lan8g1551 120 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Lan8g1551 120 CDD Ubl_ATG8 12 114 - -
Lan8g1551 120 Gene3D - 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1551 Lan-Chr8 22549351 22551783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1551 K08341 - dcr:108224802 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1551 8 22549351 22551783 Lan8g1551 8 22549351 22551783 ECH
Lan8g1551 8 22549351 22551783 Lan16g0390 16 3814999 3816903 ECH
Lan7g0424 7 2986024 2988596 Lan8g1551 8 22549351 22551783 LSH