Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0390 ATGGCTAAAACCTCCTTCAAGCTTCAACATCCTTTGGAAAGAAGACAAGCTGAGGCTTCCCGCATTAGAGAGAAGTACCCTGATAGAATACCCGTGATTGTGGAGAAAGCTGAAAGAAGCGACATTCCAGACATTGATAAGAAGAAATACCTTGTTCCAGCTGATTTGACTGTTGGTCAGTTTGTTTATGTTGTCCGCAAAAGAATTAAGCTCAGTGCAGAGAAGGCTATTTTTGTTTTCATCAACAACACCCTACCTCCAACCGCTGCTTTGATGTCTGCTATTTATGAGGAAAATAAGGACCATGATGGCTTTCTTTACATGAGTTACAGTGGAGAGAACACCTTTGGATCACAATAG 360 0.4139 MAKTSFKLQHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDHDGFLYMSYSGENTFGSQ* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0390 119 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Lan16g0390 119 MobiDBLite consensus disorder prediction 1 20 - -
Lan16g0390 119 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Lan16g0390 119 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Lan16g0390 119 CDD Ubl_ATG8 12 114 - -
Lan16g0390 119 Gene3D - 1 117 - -
Lan16g0390 119 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0390 Lan-Chr16 3814999 3816903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0390 K08341 - gmx:100784677 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0390 16 3814999 3816903 Lan16g0390 16 3814999 3816903 ECH
Lan8g1551 8 22549351 22551783 Lan16g0390 16 3814999 3816903 ECH