Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1550 ATGAGTTTGAAGAGTAGAGTAGAGGTTTCTTCTAGAAGCGTTATATCTCAAAGATGGGCACTTTTGCTCTGCTTAGGAAGCTTCTGTGCTGGGATGTTCTTCACCACAAGGATGTGGAGTATTCCTGAGCCTAAAGGACTAGCACGGCCAACAACTTCAGAAGCTGAAAAATTGAATTTACTATCAGAGGGTTGTAATTCGAGAGTTCTGCAAGAGATGGAAATGAAGCGCGAAACCAAAGACATCTATAGGGAAGCTTTTAAGAGTCACAATTCCTTGGAAACCTTGGATAAGACTATTGCAAATTTAGAGATGGAGTTATCCACTGCAAGGGCAGCTCAAGACTCAATACGAAGTGGTGCTCCTGTTCCAGAAGATATAAGGTTAACTGAATCTTCCGGCAAGAGAAAGTACCTAATGGTCGTAGGTATTAATACTGCATTTAGCAGCCGAAAAAGAAGAGACTCACTTCGTGAAACCTGGATGCCACAAGGTGAGAAGAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATGCGTTTTGTAATTGGACACAGTGCTACGTCAGGGGGTATTTTAGACAGAGCCATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTAGAAGGATACCTTGAATTGTCGGCAAAAACAAAGACATACTTTGCCACTGCTGTGAACTTATGGGATGCAGACTTCTATGTCAAAGTTGATGATGATATTCATGTAAATATAGCGACACTTGGAGAAACTCTAGCTAGACACCGATCAAAACCAAGGATATACATGGGTTGCATGAAATCTGGACCAGTCCTATCTCAAAAAGGGGTAAGGTACCATGAGCCTGAACATTGGAAGTTTGGTGAGTCAGGAAACAGGTACTTCCGTCATGCCACGGGACAGTTGTATGCCATTTCAAACGATCTCGCCTCATACATTGCACTGAACCAGGATCTTCTTCACAAGTATGCCAATGAGGATGTATCTCTAGGGTCTTGGTTCATTGGACTTGATGTGGAACACATAGATGATAGAAGACTATGTTGTGGCACTCCTCCAGATTGTGAATGGAAGGCCCAAGCAGGCAACATTTGTGTTGCTTCATTCGATTGGAGCTGCAGTGGGATTTGCAGGTCAGCCGAAAGAATGAAAGAGGTTCATAGGAGGTGCGGAGAAGGTGAAAATGCTTTGTGGAGTGCAACTTTCTAG 1224 0.4322 MSLKSRVEVSSRSVISQRWALLLCLGSFCAGMFFTTRMWSIPEPKGLARPTTSEAEKLNLLSEGCNSRVLQEMEMKRETKDIYREAFKSHNSLETLDKTIANLEMELSTARAAQDSIRSGAPVPEDIRLTESSGKRKYLMVVGINTAFSSRKRRDSLRETWMPQGEKRKKLEEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDIHVNIATLGETLARHRSKPRIYMGCMKSGPVLSQKGVRYHEPEHWKFGESGNRYFRHATGQLYAISNDLASYIALNQDLLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERMKEVHRRCGEGENALWSATF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1550 407 Coils Coil 93 113 - -
Lan8g1550 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Lan8g1550 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan8g1550 407 Gene3D - 136 352 - -
Lan8g1550 407 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 8 399 - -
Lan8g1550 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1550 Lan-Chr8 22535881 22539844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1550 1 407 Glycosyltransferase AT1G05170 75.676 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1550 K20855 - gmx:100794838 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1550 8 22535881 22539844 Lan8g1550 8 22535881 22539844 ECH
Lan6g1879 6 29870766 29875291 Lan8g1550 8 22535881 22539844 PCT
Lan8g1550 8 22535881 22539844 Lan6g1879 6 29870766 29875291 PCT