Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1879 ATGAATTTGAAAAGCAGAGGAGATTTGCATGTAAGAAGTGTTGTTTCCCAGAAATGGATGATTTTGTTATGTATTGGAAGCTTTTGTGCTGGAATGTTCTTCACAAACAGGATGTGGATTATTCCTGAGCCTAAAGCACTTGCACGAACAACAGCTATGGAAGCTGAAAAGTTGAATTTAGTTTCAGAAGATTGTCATTCAAGAATTTTGCAAGAGAAGGAAGTGAAGCCTGAAACCAAAATCATCTATAGGGAAGTTTCCAACACACATAATGCCATACAAACATTGGACAAGACTATTTCAAACTTAGAGATGGAATTAGCTGCTGCAAAATCAGCACAAGAGTCTATAAGAAGTGGTGGTCCTGTATCACAAGATATAAAGATGAGTGAATCATCATCTACTAAGAGAAGGTATCTAATGGTTATAGGAATTAATACTGCTTTTAGCAGCAGGAAAAGAAGAGACTCGATTCGTGCAACATGGATGCCACAAGGCGAAAAAAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATCCGCTTTGTAATTGGTCATGGGGCTACATCAGGGGGTATCCTAGACAGAGCAATTGAAGCAGAAAATGCAAAACATGGAGATATCCTGAGGCTGGATCATGTTGAAGGATACCTTGAATTATCGGCAAAGACAAAGATCTACTTCGCTACTGCTGTTAATTTATGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTCCATGTAAATATAGCAACACTAGGAGCAACTCTAGTTAGGCATCGATCTAAACCTCGGGTATACATTGGATGCATGAAATCCGGGCCGGTTCTTAATCAAAAAGGAGTAAGGTACCATGAACCAGAATATTGGAAATTCGGTGAGACTGGAAACAAGTATTTTCGTCACGCCACAGGACAATTGTATGCTATTTCGAAAGATTTGGCTACATACATTTCAACTAACCAGCATGTTCTTCATAAGTATGCCAATGAGGATGTCTCATTAGGTGCTTGGTTTATTGGACTTGATGTGAACCATATAGATGATAGGAGACTCTGCTGTGGTACACCACCAGGTCAGCTGAGCGGATCAAAGAGGTCCATAAGAGATGCGGCGAAGGTGAGAAAGCTTTGTGGAGTGTCTCTTTCTAACTCGGGAAGAGTAGTAGTATGA 1176 0.4005 MNLKSRGDLHVRSVVSQKWMILLCIGSFCAGMFFTNRMWIIPEPKALARTTAMEAEKLNLVSEDCHSRILQEKEVKPETKIIYREVSNTHNAIQTLDKTISNLEMELAAAKSAQESIRSGGPVSQDIKMSESSSTKRRYLMVIGINTAFSSRKRRDSIRATWMPQGEKRKKLEEEKGIIIRFVIGHGATSGGILDRAIEAENAKHGDILRLDHVEGYLELSAKTKIYFATAVNLWDADFYIKVDDDVHVNIATLGATLVRHRSKPRVYIGCMKSGPVLNQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYISTNQHVLHKYANEDVSLGAWFIGLDVNHIDDRRLCCGTPPGQLSGSKRSIRDAAKVRKLCGVSLSNSGRVVV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1879 391 Coils Coil 93 113 - -
Lan6g1879 391 Gene3D - 129 353 - -
Lan6g1879 391 Coils Coil 389 391 - -
Lan6g1879 391 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 358 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan6g1879 391 Pfam Galactosyltransferase 153 350 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan6g1879 391 Pfam Domain of unknown function (DUF4094) 16 113 IPR025298 -
Lan6g1879 391 PANTHER HEXOSYLTRANSFERASE 8 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1879 Lan-Chr6 29870766 29875291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1879 1 359 Glycosyltransferase AT1G05170 76.045 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1879 K20855 - gmx:100793931 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1879 6 29870766 29875291 Lan8g1550 8 22535881 22539844 PCT
Lan8g1550 8 22535881 22539844 Lan6g1879 6 29870766 29875291 PCT