Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1543 ATGTCTTCCCTCCTCAGATCTAATAAGCCCAAACTTTTTTCTTCCTCTCTTTCTAGAACCTTCTCTTCTCTTCCCACTTCTACTCCTCGGATCAAACCCCTCCCTACCGCCACCGAAATCTTCCACCGCAACACCGCTACGCTCTCTCCCGAGAATGAAAATCCTTCCAAGGGAAACTTGACTGGCGAGTTTGGAAAGTTCAACAGTTTCCCTTCTCTCAACAATCCAATCGCTATGCTTCCAAGTGATTCTATTGATAAGATCAATAATCCTCTGGGATACAAGGCTTCTGGACAGAACACCACTGTGCTGGCTGGAGCTGGATATGTTATTGGAAGTTCTAGACTCTGGGCTGCCAAGAGTCCAATGCTACTGGGAGCCAATGCTGTGATGGCTAGAAGTCTTCAGAGAAGTGTGGATACTGACACATTGGGATTGACTGGTCATAAACGCTTTATGAGTGACACTGCAGGTACAATCAGTGAGACAAAGACATATGGCCTTCGACCGTTATCTCCTCATCTTCCTCTTTATCAGCCACAACTATCTTCAACACTCTCAATTTTCAATAGAATCTCCGGAGCCCTCTTATCCACTGTCATATTGCTTTTTTATATGATATACATGAAAATTGGTTTGATCAGCCTCAGCTATGATTCTTTCTACCAGTTCTTGTTTTATTCATCAAAACTCAACCTACTTGCTGTTGAGTTATCTGGCTTAGCTCTGTCCTATCATCTGTATGCTGGAATTCGTCATTTAGTCCACAAGTAG 774 0.4341 MSSLLRSNKPKLFSSSLSRTFSSLPTSTPRIKPLPTATEIFHRNTATLSPENENPSKGNLTGEFGKFNSFPSLNNPIAMLPSDSIDKINNPLGYKASGQNTTVLAGAGYVIGSSRLWAAKSPMLLGANAVMARSLQRSVDTDTLGLTGHKRFMSDTAGTISETKTYGLRPLSPHLPLYQPQLSSTLSIFNRISGALLSTVILLFYMIYMKIGLISLSYDSFYQFLFYSSKLNLLAVELSGLALSYHLYAGIRHLVHK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1543 257 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 154 257 IPR034804 GO:0016020
Lan8g1543 257 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 151 255 - -
Lan8g1543 257 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 151 255 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Lan8g1543 257 SUPERFAMILY LeuD/IlvD-like 76 137 - -
Lan8g1543 257 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 169 255 IPR000701 GO:0016627
Lan8g1543 257 Gene3D Aconitase, domain 4 42 145 IPR015928 -
Lan8g1543 257 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 163 255 IPR034804 GO:0016020
Lan8g1543 257 CDD SQR_TypeC_SdhC 169 255 - -
Lan8g1543 257 Pfam Aconitase C-terminal domain 86 137 IPR000573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1543 Lan-Chr8 22483826 22486220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1543 K00236 K03885 gmx:100527396 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1543 8 22483826 22486220 Lan13g0507 13 3764525 3767859 LSH