Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0507 ATGTCTTCACTCCTCAGATCTAACAAGACCAAACTCTTCTCTACCTCTCTTTCTAGAACCTTCTCTTCTCTTCCCCGTTCCTCCGATCACTTCTACCGCAGCACCGCTACTCTCTCTTCCGCGAATGAAAATCCTTCCAACGGAAACTTCATCGCCAAGCTTGGAGGTGATTCTATTGATAAGATAAATGATTCTCTGAGTTACAAGGCTTCTGGACATGACACCAATGTGCTGGCTGGAGCTGGATATGTTAATGGAAGTTCCAGAGTCTGGGCTTCCAAGAATCCAATGCTATTGGGAGTCAATGCTGTGATGGCTAGAAGTCTTGACAGAAGTATGGATAGTAACGCATTGGGGTTGACTGGTCATAAACGCCATATGAGTGACACCACAAGTACAATCAGCGAGACAAGGGCATATGGTTTTCGGCCATTATCTCCTCATCTTCCTGTTTATCAGCCACAGCTATCTTCTACGCTTTCAATTTTCAATAGAATATCTGGAGCTCTCCTATCCACTGTCATTTTGCTATTTTATATGATATATATGAAAGTGGGTTTGATCAGCCTCAGCTATGATTCTTTCTACCAATTCTTGTTTTATTCATCAAAACTCAACCTACTTGCTGTTGAGATTTCTGGCTTAGCACTGTCCTATCATCTGTATGCTGGAATTCGTCATTTAGTCCAAAAGTTGTGA 699 0.422 MSSLLRSNKTKLFSTSLSRTFSSLPRSSDHFYRSTATLSSANENPSNGNFIAKLGGDSIDKINDSLSYKASGHDTNVLAGAGYVNGSSRVWASKNPMLLGVNAVMARSLDRSMDSNALGLTGHKRHMSDTTSTISETRAYGFRPLSPHLPVYQPQLSSTLSIFNRISGALLSTVILLFYMIYMKVGLISLSYDSFYQFLFYSSKLNLLAVEISGLALSYHLYAGIRHLVQKL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0507 232 Gene3D Aconitase, domain 4 16 122 IPR015928 -
Lan13g0507 232 SUPERFAMILY LeuD/IlvD-like 48 118 - -
Lan13g0507 232 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 126 232 IPR034804 GO:0016020
Lan13g0507 232 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 143 230 IPR000701 GO:0016627
Lan13g0507 232 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 110 229 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Lan13g0507 232 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL 110 229 - -
Lan13g0507 232 CDD SQR_TypeC_SdhC 143 229 - -
Lan13g0507 232 Pfam Aconitase C-terminal domain 58 118 IPR000573 -
Lan13g0507 232 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 139 230 IPR034804 GO:0016020
Lan13g0507 232 TIGRFAM succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 143 229 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0507 Lan-Chr13 3764525 3767859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0507 K00236 K03885 gmx:100527396 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1543 8 22483826 22486220 Lan13g0507 13 3764525 3767859 LSH