Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1537 ATGTCCCAATTTTGCCGAGAAGCTGGTCACTCCACCACCCTGCCACGGCGGTTTCAGCACCGTGTCTCGGTGATCCGGCGATGTCTCCTCCGTGTTATCAACCGCTTCATTATCTGCTCCGGAGGGAAACTCACTGATGACACGTGCCGCATGTTGCCTCCGTATGCAGGATTATCTCCTCCTCCGTCGCCGATGGTTTTCTCCGATGATGCTAGCAATGAAGAGTTACCGATTTCATTGTCACCGTCCGTGTTTAATAACCATGTCTTGGATCCTGATTTAGTTTCCTTGAAGATCACTTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGAACAAGAACAACAAGGGCGACATGGGGAAGGGCTAAGCCAAATGGGCAAGATTTTGGATGTAAGAGGAGCACGAATATCATATTGTCTTTGGGAAGTACAAGGTGATGGAACATCAGAAGAACAAATTTCAATGGCTTGCAAGGACTCGGTGGCAATATTGATTATGTTTGATCTAACGAGTCGATGCACATTAAACAGTGTCCTTGGATGGTACAAAAACGCAAGGAAATGGAATCAGACAGCAATTCCAGTGTTGATAGGGACCAAGTTTGATGAGTTCATTCAGCTCCCAATTGATTTGCAATGGACCATCGCTAGTCAGGCTAGAGCATATGCAAAGGCACTGAATGCAACTTTATTCTTTTCAAGTGCAACTTACAACATCAACGTGAATAAGATCTTCAAGTTCATAACTGCAAAGCTCTTCGACCTGCCATGGACAGTGGAAAGAAATCTAACAGTTGGGGAGCCAATTATTGATTTCTAA 846 0.4456 MSQFCREAGHSTTLPRRFQHRVSVIRRCLLRVINRFIICSGGKLTDDTCRMLPPYAGLSPPPSPMVFSDDASNEELPISLSPSVFNNHVLDPDLVSLKITLLGDCQIGKTSFLVKYVGDEQEQQGRHGEGLSQMGKILDVRGARISYCLWEVQGDGTSEEQISMACKDSVAILIMFDLTSRCTLNSVLGWYKNARKWNQTAIPVLIGTKFDEFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1537 281 ProSiteProfiles small GTPase Rab1 family profile. 91 281 - -
Lan8g1537 281 SMART rab_sub_5 97 264 - -
Lan8g1537 281 PANTHER - 71 280 - -
Lan8g1537 281 PANTHER MONOMERIC G-PROTEIN 71 280 - -
Lan8g1537 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 272 IPR027417 -
Lan8g1537 281 Pfam Ras family 98 261 IPR001806 GO:0003924|GO:0005525
Lan8g1537 281 PRINTS Transforming protein P21 ras signature 97 118 - -
Lan8g1537 281 PRINTS Transforming protein P21 ras signature 138 160 - -
Lan8g1537 281 PRINTS Transforming protein P21 ras signature 199 212 - -
Lan8g1537 281 PRINTS Transforming protein P21 ras signature 239 261 - -
Lan8g1537 281 Gene3D - 92 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1537 Lan-Chr8 22445687 22449329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1537 K07976 - gmx:100780638 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1537 8 22445687 22449329 Lan8g1537 8 22445687 22449329 ECH
Lan8g1537 8 22445687 22449329 Lan13g0505 13 3744674 3748202 LSH