Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0505 ATGTCCCAGTTTTGCCGTGAAGTTAGTCATTCCACCACCCTGCGGTGGCGGTTTAAGCACCGTGTCTCGGTGCTACGGCGATCCCTCCTCCGCTTCCTCCACAGCATTATGATTTGCTCTGGAAGGAAGCATACTAATTCAACGTACCGCATGCTGCAGTCGCATGCAGCATTGCCTTCTCCGCCGCCGCAGCCGCCGATAGATTTCTCCGACGAGGCTAGCCTTGAAGCGTTGCCGGTGGCCTTGCCACCTCCACTGTTTAATACCCATGATTTGGATTCTGATTTGGTTTCCTTGAAGATCACTTTGTTGGGTGATTGTCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTTGGGGATGTAAAAGATCAGCAAGGGAGACAAGGTAAAGGGCCAAACCAAATGGACAAGATTTTGGATGTAAGAGGAGCACGAATATCCTATTGTATTTGGGAGGTACAAGGTGATGGAAAATCAGAAGAACAAATTCCAATAGCTTGCAAGGACTCAGTGGCAATTTTGATTATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTCCCTGGATGGTACAAAGAAGCCAGGAAATGGAATCAGACAGCAATTCCAGTGTTGATAGGAACCAAATTTGATGATTTCATTCAGCTCCCAATTGATTTGCAATGGACCATCGCCAGTCAGGCAAGAGCATATGCAAAGGCCCTGAATGCAACGTTGTTCTTTTCAAGTGCAACCTACAACATCAACGTGAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTCGATCTACCATGGACAGTGGAAAGAAATCTAACAGTTGGAGAGCCAATTATTGATTTCTAA 852 0.4495 MSQFCREVSHSTTLRWRFKHRVSVLRRSLLRFLHSIMICSGRKHTNSTYRMLQSHAALPSPPPQPPIDFSDEASLEALPVALPPPLFNTHDLDSDLVSLKITLLGDCQIGKTSFLVKYVGDVKDQQGRQGKGPNQMDKILDVRGARISYCIWEVQGDGKSEEQIPIACKDSVAILIMFDLTSRCTLNSVPGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0505 283 Pfam Ras family 100 263 IPR001806 GO:0003924|GO:0005525
Lan13g0505 283 PANTHER - 84 282 - -
Lan13g0505 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 274 IPR027417 -
Lan13g0505 283 ProSiteProfiles small GTPase Rab1 family profile. 93 283 - -
Lan13g0505 283 PANTHER MONOMERIC G-PROTEIN 84 282 - -
Lan13g0505 283 SMART rho_sub_3 101 265 IPR001806 GO:0003924|GO:0005525
Lan13g0505 283 SMART rab_sub_5 99 266 - -
Lan13g0505 283 PRINTS Transforming protein P21 ras signature 99 120 - -
Lan13g0505 283 PRINTS Transforming protein P21 ras signature 140 162 - -
Lan13g0505 283 PRINTS Transforming protein P21 ras signature 201 214 - -
Lan13g0505 283 PRINTS Transforming protein P21 ras signature 241 263 - -
Lan13g0505 283 Gene3D - 91 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0505 Lan-Chr13 3744674 3748202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0505 K07976 - gmx:100780638 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1537 8 22445687 22449329 Lan13g0505 13 3744674 3748202 LSH