Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1513 ATGGCCACCTTCACTTCTTCTTTTTCTCTTTCCACACACATTCAATCTTCCCGAACCAAATTAACCCTTTCTTCCATTCGCTCCCCCCTTCCCAATTTCTCATGCTACTATGGACGAGGAGGCCTTCGACCTTCTAAATTTGTTATTCGCTGCTCCACCTCTTCCGTCACAGATATTCCAACTGTTTCTGAGACAAAGTTAAATTTCCTCAAGGCATATAAGCGACCAATCCCTAGTATCTACAACAGTGTGTTGCAGGAGATCATTGTCCAGCAACATTTGATGAGATACAAAAGGTCATACCGCTATGACCCGGTATTTGCTCTTGGTTTTGTCACTGTATATGATCAACTCATGGAAGGGTATCCGAATGATGAGGATCGAAATGCCATCTTCCAAGCATACATTAAATCATTGAATGAAGATCCGGACCAATACAGAGTAGACGCACAAAAGTTGGAGGAGTGGGCTCGGGATCAAAACTCAACTTCCTTGGTTGATTTTTCCTCAAGAGATGGAGAAGTTGAGAGAATATTAAAGAATATTGCCGAAAGAGCAGGAGGAAAGGGGGAGTTCAGTTATAGTCGCTTCTTTGCAATAGGCCTCTTTCGTCTTCTTGAATTGGCAAATGCAATGGAACCATCAATTTTAGAAAAGCTTTGTGCAGCTTTGAACGTCAACAAAAGAAGTGTTGATGGGGACCTGGATCTGTATCGTAACTTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTAAAGGAATATGTTGACAGGGAGAAGAAAAAAAGAGAAGAAAGGTCTGAACCACAAAAGGCTAACGAGGCCATTACGAAATGTTTAGGATAG 846 0.4184 MATFTSSFSLSTHIQSSRTKLTLSSIRSPLPNFSCYYGRGGLRPSKFVIRCSTSSVTDIPTVSETKLNFLKAYKRPIPSIYNSVLQEIIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPNDEDRNAIFQAYIKSLNEDPDQYRVDAQKLEEWARDQNSTSLVDFSSRDGEVERILKNIAERAGGKGEFSYSRFFAIGLFRLLELANAMEPSILEKLCAALNVNKRSVDGDLDLYRNLLSKLVQAKELLKEYVDREKKKREERSEPQKANEAITKCLG* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1513 281 Pfam Thylakoid formation protein 61 266 IPR017499 GO:0010207|GO:0015979
Lan8g1513 281 Coils Coil 238 268 - -
Lan8g1513 281 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 277 - -
Lan8g1513 281 MobiDBLite consensus disorder prediction 258 281 - -
Lan8g1513 281 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 277 IPR017499 GO:0010207|GO:0015979
Lan8g1513 281 MobiDBLite consensus disorder prediction 258 272 - -
Lan8g1513 281 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 57 263 IPR017499 GO:0010207|GO:0015979
Lan8g1513 281 Hamap Protein Thf1 [thf1]. 56 264 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1513 Lan-Chr8 22185764 22189061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1513 - - aip:107632658 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1513 8 22185764 22189061 Lan13g0489 13 3612821 3616648 LSH