Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0489 ATGACCACCGTTACTTCTTATTTATCTCTTTCCACTCTCAGTCATTCTTCCCAAACCAAACGAACCCTCTCCTCCACTCGCTTCCCTTTCCCCAATTCAGATTCCTCTCGATCGCGCTTCAATTTCTCATCCAACTCTGTACAAGCTTTTCGACCTTCCAATCCTCTTTCCAAATTTGTTATTCGATGCTCCTCTTCTGTAACAGATATTCCAACTGTTTCTGAGACAAAGTTAAATTTCCTCAAGGCATATAAGCGACCAATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTCATTGTTCAGCAACATTTGATGAGATACAAGAAATCATACCGCTATGACCCTGTGTTTGCTCTTGGTTTTGTCACTGTATATGATCAACTCATGGAAGGGTATCCTAGCGACGAGGATCGAAATGCCATCTTCCAAGCATACATTAAATCATTGAATGAAGATCCAGACCAATACAGAGTAGATGCACAGAAGTTGGAAGAGTGGGCTCGGGTTCAAAACTCAACTTCCTTGGTTGACTTTTCCTCCAAAGAAGGAGAAGTTGAGGGGATATTAAAGGATATTGCACAAAGAGCAGGAGGGAAGGGGGAGTTCAGTTATAGTCGTTTCTTTGCAATAGGCCTCTTTCGTCTTCTTGAGTTGGCAAATGCAATGGAACCAGCAATTTTGGAAAAGCTTTGTGCAGCTTTGAACATCAACAAAAGAAGCGTTGACCGGGACTTGGATGTGTATCGCAATCTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTCCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGTCTGAACCACAAAAGGCTAATGAGGCTATCACAAAATGTTTGGGCGAACAATTTTCTGGCCTATAG 897 0.4236 MTTVTSYLSLSTLSHSSQTKRTLSSTRFPFPNSDSSRSRFNFSSNSVQAFRPSNPLSKFVIRCSSSVTDIPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSDEDRNAIFQAYIKSLNEDPDQYRVDAQKLEEWARVQNSTSLVDFSSKEGEVEGILKDIAQRAGGKGEFSYSRFFAIGLFRLLELANAMEPAILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERSEPQKANEAITKCLGEQFSGL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0489 298 Hamap Protein Thf1 [thf1]. 67 275 IPR017499 GO:0010207|GO:0015979
Lan13g0489 298 Coils Coil 249 279 - -
Lan13g0489 298 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 288 IPR017499 GO:0010207|GO:0015979
Lan13g0489 298 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 288 - -
Lan13g0489 298 Pfam Thylakoid formation protein 72 277 IPR017499 GO:0010207|GO:0015979
Lan13g0489 298 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 68 274 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0489 Lan-Chr13 3612821 3616648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0489 - - aip:107632658 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1513 8 22185764 22189061 Lan13g0489 13 3612821 3616648 LSH