Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1395 ATGAGTGGTTCTTCTTTAAGTGCAGTAATAGGAAGGCACCCATCAAGTGATGGAGTTACCCAAATGGGTGGAACCATAAGGCATAAGAGGAAATGCAGAGACATCTCTTTTCTTGTAATCTTCATTGCATTTTGTATAGCAATGATTGTTAACTCCAGCTTTGGTTTCAACCAAGGGAACCCACTAAGGCTTACTCATGGGCTGGACTACAAAGGGAATGTGTGTGGAGATAAGTTTGCATACCACGGCCTTGGTGAATTGGAGCTCAGATATTGGCAAAATCCTAATCAGGTTTATCAGAGTGGATTGAAGGGTAGCCAATTTAAACTGGCCAATGCCCGCAGTATATGTTTATTGGACTGCCCTATACCTTCTGATGATTCTCTTGACTGGGTTTGTGATTATCCGGAAGGAGAAATTAGTCTTTCGATGACCGATTGGATTAATAGGAAATACGATTATTTTGAGTTTCTGACACCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGTCCATGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCCCGAGCATCGAACAGTTCTTTGAAGCTTTGGCAGCAGATGGGTGGAGTTAACATATATGAAGACATTGTTATTGACAAGTCCATTCACAAGTTAATTAATTCTCATTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCATGGCCAGTACTCATTGTTTGTGGAGGGATTCTACCTCTTTTTCTGTCTGTGGTTTGGTTGTTGATGATTCGGCATTTTGTTGCTGCGATGCCTTGGATAACAGTGGTGCTCTTTAATGTTCTGATAATATCGGTCACAATGTTCTACTACCTAAAAGCTGGATGGATGGGAAATGATGTCATTTCTCCCATCATTGGAGAGCACGACCCTTACATCAATGTATCTGGGAGGGAGCTGACTCACCTACGCACAGCTACTATAGTTATGACCTTTATCATGTCTGTTGCCATCCTTACATCAATTGCTATTGTTCGGCGCATCCTTATGGCAACATCTGTCCTAAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGTACTCATTATTTTTCCACTCATACCATATTGCATCCTTGCTGTGTTTTACATGTTCTGGATTTCAGCTGCTCTCCACTTGTTAAGCACAGGCCAGATTGTTCAGAATGACTGCAACTCTAACTGCTGCACATATGACCTCGTGGCAAAACGGGTGAACTGTGACCGCTGTTGTGGATACAGCATTCATTACACACCACATATTAGGGTTGCCATCCTTTTCCACCTATTTGGGTGTTATTGGGCTACACAATTCTTCAGGGCATGCTCCTCAACAGTGATTGCTGGATCTGTTGCTTCTTATTACTGGGCCCATGGTGAAACATCTCCGGAAATTCCATCTCTGACAGTCTTTTCCTCCATGAAGAGGCTCATGCACTACAGTCTTGGGTCTGTGGCTCTTGGGTCTCTGATTGTATCATTTGTAGAATCAATCCGATTTCTGCTTGAATCAATTCGTCGCAAACTAAAAGTCGATAGTTACGAGCCTGACAACTGTTTAGGCAAGGCTGCATACCATTCTTCTCAATGTTTTCTCAGGTGTATTGAGTGGATCATGAAATCAGCAAACCGGAATGCTTACATCATGATTGCTATAGGTGGCAAAAGTTTCTTTGTGGCCTCTTCTATTGCAACAGAGTTGATCATGAATAACGTCCTGAAGATTGGGCGTCTGAATGTAATTGGAGATGTCATTCTGTTCCTTGGAAAACTATGTGTCAGTCTCTCGAGTGTTGTGTTTGCATTCCTCATGTTGGACACACACATGTACAAGTCTTCCCATGACAAGATCTCATCCCCGCTCTTGCCTGTTACGGTTTGCTGGGCTCTTGGTTATATTGTTGCAAGTCTTTTCTTTGCGGTTGTGGAGATGTCAATCGACACCATCGTTCTCTCATACTGCCAAGATTCTGAAGAGCACCAAGGGACAGCTCATTATGCTCCACCCCTTCTCATTGAAACTCTCAGTGACCAAAATGAAGTGCAGAGACTTACACAAGCACCCCAATGA 2106 0.4264 MSGSSLSAVIGRHPSSDGVTQMGGTIRHKRKCRDISFLVIFIAFCIAMIVNSSFGFNQGNPLRLTHGLDYKGNVCGDKFAYHGLGELELRYWQNPNQVYQSGLKGSQFKLANARSICLLDCPIPSDDSLDWVCDYPEGEISLSMTDWINRKYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNSSLKLWQQMGGVNIYEDIVIDKSIHKLINSHSAVLKRYMADIGKAWPVLIVCGGILPLFLSVVWLLMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWMGNDVISPIIGEHDPYINVSGRELTHLRTATIVMTFIMSVAILTSIAIVRRILMATSVLKVAAKVIGEVQVLIIFPLIPYCILAVFYMFWISAALHLLSTGQIVQNDCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIRVAILFHLFGCYWATQFFRACSSTVIAGSVASYYWAHGETSPEIPSLTVFSSMKRLMHYSLGSVALGSLIVSFVESIRFLLESIRRKLKVDSYEPDNCLGKAAYHSSQCFLRCIEWIMKSANRNAYIMIAIGGKSFFVASSIATELIMNNVLKIGRLNVIGDVILFLGKLCVSLSSVVFAFLMLDTHMYKSSHDKISSPLLPVTVCWALGYIVASLFFAVVEMSIDTIVLSYCQDSEEHQGTAHYAPPLLIETLSDQNEVQRLTQAPQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1395 701 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 5 698 IPR007603 GO:0022857|GO:0055085
Lan8g1395 701 Pfam Plasma-membrane choline transporter 327 670 IPR007603 GO:0022857|GO:0055085
Lan8g1395 701 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 5 698 - -
Lan8g1395 701 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1395 Lan-Chr8 20813186 20819485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1395 K15377 - gmx:100803501 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1395 8 20813186 20819485 Lan8g1395 8 20813186 20819485 ECH
Lan8g1395 8 20813186 20819485 Lan13g0572 13 4474087 4480180 LSH