Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0572 ATGAGGGGTCCTTTAGGTGCAGTAATAGGAAGATACCCATCAAGTGATGGAGTTAACCAAATGGGTGGAATCATAAGGCATAATAGGAAATGCAGAGACATCACTGTTCTTCTGATCTTTATTGCATTTTGGATATCAATGATTGTAAACTCCAGCTTTGGTTTCAACCAAGGGAACCCACTAAGGCTTACTAATGGGCTGGACTACAAAGGGAATGTGTGTGGGGATAAGCATGCACACCCTGACCTCGGTGAATTGGAGCTCCGGTATTGGCAAAATCCTAATCAGGTTTATCAGAGCGGATTGAAGAATAGCCAATTTAAGCTGGCCAATGCCCGTAGTATATGTTTGTTGGACTGCCCTATACCTTCTGAAGACTCTCTTGACTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCGATGACTGATTGGATTAATAGGAACTACGATTATTTTGAGTTCTTGACGCCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCATGTTATCCTGTCATATTTCCTAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCCCGAGCATCGAACACGTCTTTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATAAATGAAGACATTGTTATTGATAAGTCCATCCACAAATCTATTAATTCTCATTCAGCTGTCTTAAAGAGGTACATGGCTGACGTAGGAAAGGCGTGGCCTGTGCTCATCGTTTGTGGAGGGATTTTACCTCTTTTTCTGTCTGTGGTTTGGTTGGTGATGATTCGGCATTTTGTTGCTGCAATGCCTTGGATAACAGTGGTGTTCTTTAATGTTCTAATAGTATCAGTCACAATTTTCTACTATCTAAAAGCTGGATGGATCGCAAATGATGCCATTTCTCCCATCATTGGAGAGCATGACCCTTACATTAATGTATTTGGGAGGGAACTGACTCATCTACGTGTGGCCACTGTAGTTATGACCTTTATCATGGGTGTTGCCATTCTTACATCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTCCTGAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCACTCATTATTTTTCCACTCATACCATATGGCATCCTTGCCGTGTTTTACATGTTCTGGATTTCCGCTGCTCTCTACTTGTTTAGCTCTGGCCAGATTGTTCAGAATAACTGCAACTCTAACTGCTGCACATATGATCTCCTCGCAAAACGGGTGAACTGTGACCTGTGTTGTGGATACAGCATTCACTACACCCCACATATTGGGGTTGCCATCCTTTTTCACCTATTTGGGTGTTATTGGGCTACACAATTTTTCATGGCATGCTCCTCAACAGTGTTTGCCGGGTCGGTTGCTTCTTATTACTGGAACCATGGTGAAACATCTCATGAAATTCCATTTCTTTCAGTCTTTTCCTCCATGAAGAGGCTCATGCGTTACAGTCTTGGGTCTGTGGCTCTTGGCTCTCTGATTGTATCATTTGTGGAATCAATCCGCTTTCTGCTTGAATCTATCCGTCGCAGACTAAAAGTCTCTAGTTATGAGCCTGACAACTGTTTAGGAAGGGCTGCATACCAATCTGCTCAATGTTTTCTCAGGTGTATTGAGTGGATCATCAAATCAGTAAACCGAAATGCTTACATCATGATTGCTATAACAGGTAAAAGTTTCTTTGTGGCTTCTTCTACTGCAACAGAACTGATCATGAATAACATTCTGAAGATTGGGCGTCTCAATGTAATTGGAGATGTCATTTTGTTCCTCGGAAAACTATGTGTCAGCCTCTCAAGTGTTGTGTTTGCATTCCTTATGTTGGACACGCACAAGTACAAATCTTCCCGTTACAAGATCTCATCTCCACTTTTGCCTGTTCTGGTTTGCTGGGCCCTTGGATATATTGTTGCAACCCTTTTCTTTGCAGTTGTGGAGATGTCAATTGACACCATAGTTCTCTCATATTGCCAGGATTCTGAAGAGCACCAAGGGACAGCCCAGTATGCTCCACCTCTTCTCGTTGAAACTCTCAGTGACCAAAATGAGACGCAGAGACTTACACAAGGAACCCAATGA 2103 0.4256 MRGPLGAVIGRYPSSDGVNQMGGIIRHNRKCRDITVLLIFIAFWISMIVNSSFGFNQGNPLRLTNGLDYKGNVCGDKHAHPDLGELELRYWQNPNQVYQSGLKNSQFKLANARSICLLDCPIPSEDSLDWVCDYPEGDIRLSMTDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSHSAVLKRYMADVGKAWPVLIVCGGILPLFLSVVWLVMIRHFVAAMPWITVVFFNVLIVSVTIFYYLKAGWIANDAISPIIGEHDPYINVFGRELTHLRVATVVMTFIMGVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYGILAVFYMFWISAALYLFSSGQIVQNNCNSNCCTYDLLAKRVNCDLCCGYSIHYTPHIGVAILFHLFGCYWATQFFMACSSTVFAGSVASYYWNHGETSHEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESIRRRLKVSSYEPDNCLGRAAYQSAQCFLRCIEWIIKSVNRNAYIMIAITGKSFFVASSTATELIMNNILKIGRLNVIGDVILFLGKLCVSLSSVVFAFLMLDTHKYKSSRYKISSPLLPVLVCWALGYIVATLFFAVVEMSIDTIVLSYCQDSEEHQGTAQYAPPLLVETLSDQNETQRLTQGTQ* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0572 700 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
Lan13g0572 700 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 697 - -
Lan13g0572 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 697 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0572 Lan-Chr13 4474087 4480180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0572 K15377 - gmx:100803501 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1395 8 20813186 20819485 Lan13g0572 13 4474087 4480180 LSH