Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0704 ATGGCAGCTTCAACCTTAAACATGCTTAATACAATTCCTTTCTCCAAATCCCAACTCGAATCTATTACTCACACCAAATTTCCAACAACACCACCATCATTATCTCTCACCCAAAATTCTCTATCCACAATAAGAAAACTCATATCATGCAAAACCAACTTGCACGAAACTAGTTCCTCCTTTTCATCACTTAACCAAGAAGTAGTGGAAAAAGAAGAAGAAGAACAAAAGTTAGAGGATCATCTACAACTACCTCAGGCATGGCGCGAAATCCATGGCGAGAATGATTGGATCGGGCTTCTTGACCCAATGAATCCACTCCTACGATCAGAGCTAATCCGCTATGGTGAAATGGCTCAGTCATGCTACGATGCCTTCGACTTTGACCCTTTCTCTAAGTACTGTGGAAGTTGCAGGTTCACACCGCCGAATTTCTTCGACTCGCTAGGGATGCACCACCACGGTTACAACGTCACGCGCTACCTCTACGCCACCGCGAATATTAATCTGCCAAATTTCTTTAAGCATTCAAGGTGGTCTAAGATGTGGAGCAAGAATGCTAACTGGGCTGGATATATAGCAGTTTCGAATGATTATACAAGTAAGAGAATTGGACGTAGGGATATCACAATAGCATGGCGTGGAACGGTGACGTATTTGGAGTGGATCGCTGATCTTATGGATATCCTCAAACCTATCTCTGCAAACAACATCCCTTGCCCTGATCAATCAGTTAAGGTTGAATCTGGGTTCTTGGAACTCTACACGGACAAGGAAGAGAGTTGTGGTTACTGCAAATACTCAGCAAGAGAACAAATTCTCACAGAGGTGAAGAGGTTATTAGAAATGTACCCTAATGAAGAACTAAGCATAACCATCACAGGACACAGCCTAGGGAGTGCATTGGCTATATTGAGTGCATATGACATTGTAGAAACAGGTTTGAACGTGTTAAATGATTGCCGCGCCGTGCCGGTTTCGGTGCTATCATTTTCAGGTCCCAGGGTGGGAAACGTGAGGTTCAAGGAGAGGTTGGAGAAGCTAGGGTTGAAGGTGTTGAGGGTAGTGAACGTGCATGATATGGTGCCTAAGTCACCGGGGTTTGTGTTGAATGAGAAGCTGCCACCGTCGGTGATGAAGCTGGTGGAGGGTTCACCGTGGAGTTATTCACATGTTGGGGCGGAATTGGTGTTGGATCATAAGAACTCACCGTTCTTGAATCCAAATGCTGATGCTGTATGTGCCCATAACTTGGAGGCTCTTTTGCATTTACTTGACGGATACCATGGAAAGGGTGAAAGGTTCATGTTAGCGAGTGGGAGAGACCCTGCTCTAGTGAACAAGGGTTGTGATTTCTTGAAAGATGATTACATGGTTCCACCAAACTGGAGGCAAGATGAGAACAAAGGCATGATTAAGAGCAATGATGGACGTTGGATTCAGCCTGAGCGACCCAAACTTGATGATCACCCTCAAGATATTCATCACCATCTCATGCAACTTGGTCTTGTTTCATATGATACTTCAATGGTGGACATTCAAGACAAATATATATAG 1557 0.4425 MAASTLNMLNTIPFSKSQLESITHTKFPTTPPSLSLTQNSLSTIRKLISCKTNLHETSSSFSSLNQEVVEKEEEEQKLEDHLQLPQAWREIHGENDWIGLLDPMNPLLRSELIRYGEMAQSCYDAFDFDPFSKYCGSCRFTPPNFFDSLGMHHHGYNVTRYLYATANINLPNFFKHSRWSKMWSKNANWAGYIAVSNDYTSKRIGRRDITIAWRGTVTYLEWIADLMDILKPISANNIPCPDQSVKVESGFLELYTDKEESCGYCKYSAREQILTEVKRLLEMYPNEELSITITGHSLGSALAILSAYDIVETGLNVLNDCRAVPVSVLSFSGPRVGNVRFKERLEKLGLKVLRVVNVHDMVPKSPGFVLNEKLPPSVMKLVEGSPWSYSHVGAELVLDHKNSPFLNPNADAVCAHNLEALLHLLDGYHGKGERFMLASGRDPALVNKGCDFLKDDYMVPPNWRQDENKGMIKSNDGRWIQPERPKLDDHPQDIHHHLMQLGLVSYDTSMVDIQDKYI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0704 518 Gene3D alpha/beta hydrolase 87 494 IPR029058 -
Lan8g0704 518 MobiDBLite consensus disorder prediction 464 490 - -
Lan8g0704 518 Pfam Lipase (class 3) 211 368 IPR002921 GO:0006629
Lan8g0704 518 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 36 499 - -
Lan8g0704 518 PANTHER PHOSPHOLIPASE A1-IGAMMA2, CHLOROPLASTIC 36 499 - -
Lan8g0704 518 Coils Coil 61 84 - -
Lan8g0704 518 SUPERFAMILY alpha/beta-Hydrolases 114 429 IPR029058 -
Lan8g0704 518 MobiDBLite consensus disorder prediction 469 490 - -
Lan8g0704 518 CDD Lipase_3 156 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0704 Lan-Chr8 9137645 9143132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0704 5 503 Acyl Lipid Metabolism Gene Families AT2G30550 59.922 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0704 - - gmx:100779676 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1257 5 26282381 26284901 Lan8g0704 8 9137645 9143132 PCT
Lan8g0704 8 9137645 9143132 Lan5g1257 5 26282381 26284901 PCT