Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1257 ATGGCTACATCAATCCCAAACACTCTCATTCCTTTTCCCAGAACCAATCAATCTTCCTTCAAATCCAATCACCCTAAATTCCAAGCACCACCATTCATTTCTAAAACTATAACCACAAATACAAAACCCACTTTTACATGCAACTCTTCTTTATCTTCCACAATCAATGATCTCCAACAACAACAACAACCACAACAAAAACAAAGTTATGAACCAGATATAGCAAATATTTGGCGAAAAATCCATGGCCAAGACAACTGGGTTGGGCTTTTGGATCCAATGAACCCTGTTATGAGGGCAGAGCTGATCCGCTATGGTGACATGACTCAAGCATGTTATGATGCTTTTGACTATGACCCATACTCTAAGTATTGTGGTGGTAGCAGGTATTCACTCCTAGAATTCTTTGAGTCTCTTAACATGACCCACCTTGGCTACACGGCCACGCGCTTCCTCTACTCCACCGCGAATGTTAACCTACCAAAATTCTTCAAGAAGTCACGGTGGCCAGACAAGTTGTGGAGTCCACATGCTAACTGGGCAGGTTATGTCGCCGTATCGGATGATGCCACGACCAAGGCACTTGGTCGTAGGGACATCATCGTCTCATGGCGAGGAACCGTGACCAACGTGGAATGGGTAGCAGACCTAACGAATATTCTGACACCTCTGTATGAGGGTATTCCTAATTGTAAGGATGAAAAGATTAAGGTTGAAGCCGGTTTCTTGGATCTATACACCGATAGGGAGAAGGTCTGTGGCTACTGCAAGTATTCGGCTAGGCAACAGGTCCTTGGAGAGGTGAAAAGATTGGTGGAGAAATACCCTAATGATGAACTAAGCATTACCATAACAGGGCATAGCTTAGGGAGTGCAATGGCTATACTGAGTGCATATGACATAGCAGAAACAAAGCTGAACGTAGCAAAGAATGGGAGGAAGATACATGTTTCGGTGTTTTCATATTCAGGGCCAAGGGTAGGTAACTTGAGGTTCAAAAAGAGACTGGAGAATGAGCTAGGTGTGAAGGTGTTGAGGGTTCACAATACTCATGATTTGGTACCAAAGTCACCAGGTATTATATTAAATGAGACTTTACCATCTTGGTTGCTGAATTTGGTGCAAGATTTCCCTTGGTGTTACACTCATGTTGGAGAGGATTTGGAGTTGGATCATAAGAAATCTCCTCACTTGAATCCTAATGGTGATAGTGCATGTGCTCATAACTTGGAGGCTCATTTGCATTTGATTGATGGATACCATGGGAAGAATGAAGAGTTTAAGCTAACAAGTGGGAGAGACCTTGCTCTTGTGAACAAGGGAAGTGACTTTCTAGTAGATGCTCTTGCAGTGCCACCAAGATGGAGGCAAGAATTGAACAAGAACATGACCCTCACTGAAGATGGAAAGTGGGTGCAAGCTGAGCGCACAAAACTTGAAGATCACCCTGAAGATATTGATTTCCTTCTCCAACAACTAGGCCTTGCTGCCCCATGA 1497 0.4362 MATSIPNTLIPFPRTNQSSFKSNHPKFQAPPFISKTITTNTKPTFTCNSSLSSTINDLQQQQQPQQKQSYEPDIANIWRKIHGQDNWVGLLDPMNPVMRAELIRYGDMTQACYDAFDYDPYSKYCGGSRYSLLEFFESLNMTHLGYTATRFLYSTANVNLPKFFKKSRWPDKLWSPHANWAGYVAVSDDATTKALGRRDIIVSWRGTVTNVEWVADLTNILTPLYEGIPNCKDEKIKVEAGFLDLYTDREKVCGYCKYSARQQVLGEVKRLVEKYPNDELSITITGHSLGSAMAILSAYDIAETKLNVAKNGRKIHVSVFSYSGPRVGNLRFKKRLENELGVKVLRVHNTHDLVPKSPGIILNETLPSWLLNLVQDFPWCYTHVGEDLELDHKKSPHLNPNGDSACAHNLEAHLHLIDGYHGKNEEFKLTSGRDLALVNKGSDFLVDALAVPPRWRQELNKNMTLTEDGKWVQAERTKLEDHPEDIDFLLQQLGLAAP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1257 498 CDD Lipase_3 156 392 - -
Lan5g1257 498 Gene3D alpha/beta hydrolase 77 486 IPR029058 -
Lan5g1257 498 MobiDBLite consensus disorder prediction 1 25 - -
Lan5g1257 498 PANTHER PHOSPHOLIPASE A1 1 491 - -
Lan5g1257 498 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 491 - -
Lan5g1257 498 SUPERFAMILY alpha/beta-Hydrolases 161 419 IPR029058 -
Lan5g1257 498 Pfam Lipase (class 3) 201 360 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1257 Lan-Chr5 26282381 26284901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1257 54 498 Acyl Lipid Metabolism Gene Families AT2G30550 58.000 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1257 - - gmx:100815007 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1257 5 26282381 26284901 Lan8g0704 8 9137645 9143132 PCT
Lan8g0704 8 9137645 9143132 Lan5g1257 5 26282381 26284901 PCT