Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0657 ATGGGAGTTGTTACTGTTGCTGAATTGAAGCCAAGCATGTCAGGGAAGAGGACTTTTAGGCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCGATATCGGACGTGTCTATTGATCTTACCATCGAAATAGGAGGTTCAAGCTTTGCACCTCACAAGTTTCCTCTAGTTTATCGGAGTGGAAGAATTAGAAAAATGCTGTTAGAAGCGAAAGATACAAAAGTTTCATGCATAAGTCTCCCAAGTGTGCCAGGTGGTGCAGAAGCAATTGAGCTAGCAGAAAAGTTCTGTTATAGCGCTAATGTCGAGTTCACCCTCTCGAACGTTGCTATGCTCAGATGTTTAGCACAGTTTCTGGACATGACGGAAGAATATGCAGAGAAAAACCTTGTGACAAGAGCTGAAGCATATCTAAAGGACATAGTGCTACCAAGTATACCAAACACAATATCTGTTCTTCACCATTGTGAAACTCTTCTGCCATATTCGGAAGAGATTAATCTTGTTAGCAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTTACCTCTGGCTTGTTAAAACTAGACCACAACTTCCGTTCGAAAACTATCTCAAACATGGAACCAGAAACACCCTCAGATTGGTGGGGAAAATCTCTCAGTGTTCTTAATCTTGATTTCTTTAAGAGAGTTTTAACTGCAGTTAAGTCAAAGGGACTAAAACAAGACATGATCAGCAAGATTTTGATAAACTATGCGCATAATTCTCTTCACGGGATTGTTGTTAGGGACCCTCAAACAGTTAAAGGAAGTTTGCTTGACATAGAATTTCAGAAGAAACAAAGGGTCATTGTTGAAGCCATAGTTAGCTTATTACCAACACAATCAAGGAAAAGTCCAGTTCCAATGGCATTTCTCTCAAGTTTGTTCAAAACTGCAATAGCAGCATCTGCATCTACTAAATGCAGGTCTGATTTGGAGAGGAGGATTGGTCTACAACTTGACCAGGCAATTCTTGAAGACATTCTAATTCCAACAAACTCACAACATCAAAATACACATAGTACAATGTATGATACAGATTCAATTTTGAGGATTTTTTCCATTTTCCTTAATTTGGATGACGAGGATGAAGTCGAAACCCGGTTGAGAGATGAAAGTGAAATGATTTATGACTTTGATAGCCCTGGATCTCCAAAACAAAGCTCAATTCTAAAGGTATCCAAATTGTTGGACAATTATCTTGCTGAAGTGGCACTAGACTCAAACTTGTTGCCATCAAAGTTCATATCACTTGCGGAACTACTTCCAGATCACGCTCGTGTTGTAAGTGATGGACTGTATAGAGCAGCTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCGGAGCGCTACCGCTTATGCAAAAGTATAGATTGCCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAAAATGAAAGGCTGCCAGTGCAGATGGCAGTGCAGGTTCTCTACATTGAGCAAATCAGGCTCCGCAATGCTATGAACGGTGGCCACAATCAACTCTTCTTTGGTGGACTTAATAGTCAATTCCCGCAACGTTCAGGAAGTGGTGCAGGAAGTGGAGCCATCTCCCCTAGAGATAACTATGCATCAGTAAGACGAGAGAACCGAGAGCTGAAGCTTGAAGTAGCAAGAATGAGAATGAGACTCACTGACTTGGAGAAAGATCATGTTACTATGAAGCAGGAGCTTGTAAGGTCACATCCTGCTAACAAGTTATTTAAATCATTCACCAAGAAACTAAGCAAGCTTAATGCTCTATTTCGGATAAATAGTTATAAGCCAAATGGTGCTTGTTCAGAGAGCAGGTTCCCTTTTGCAAAGAGAAGGCATCACTCAGTTTCATGA 1893 0.4083 MGVVTVAELKPSMSGKRTFRPSSSIRHATEWPISDVSIDLTIEIGGSSFAPHKFPLVYRSGRIRKMLLEAKDTKVSCISLPSVPGGAEAIELAEKFCYSANVEFTLSNVAMLRCLAQFLDMTEEYAEKNLVTRAEAYLKDIVLPSIPNTISVLHHCETLLPYSEEINLVSRLINAIANNACKEQLTSGLLKLDHNFRSKTISNMEPETPSDWWGKSLSVLNLDFFKRVLTAVKSKGLKQDMISKILINYAHNSLHGIVVRDPQTVKGSLLDIEFQKKQRVIVEAIVSLLPTQSRKSPVPMAFLSSLFKTAIAASASTKCRSDLERRIGLQLDQAILEDILIPTNSQHQNTHSTMYDTDSILRIFSIFLNLDDEDEVETRLRDESEMIYDFDSPGSPKQSSILKVSKLLDNYLAEVALDSNLLPSKFISLAELLPDHARVVSDGLYRAADIFLKVHPNIKDSERYRLCKSIDCQKLSQEACSHAAQNERLPVQMAVQVLYIEQIRLRNAMNGGHNQLFFGGLNSQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVTMKQELVRSHPANKLFKSFTKKLSKLNALFRINSYKPNGACSESRFPFAKRRHHSVS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0657 630 Pfam BTB/POZ domain 38 123 IPR000210 GO:0005515
Lan8g0657 630 ProSiteProfiles NPH3 domain profile. 211 504 IPR027356 -
Lan8g0657 630 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Lan8g0657 630 Coils Coil 544 578 - -
Lan8g0657 630 Gene3D Potassium Channel Kv1.1; Chain A 26 141 IPR011333 -
Lan8g0657 630 PANTHER OS12G0117600 PROTEIN 25 623 IPR043454 -
Lan8g0657 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 623 - -
Lan8g0657 630 Pfam NPH3 family 211 480 IPR027356 -
Lan8g0657 630 SUPERFAMILY POZ domain 22 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0657 Lan-Chr8 8782768 8787256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0657 1 454 EF-hand Containing Proteins AT2G47860 57.613 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0657 - - rcu:8287167 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0889 16 15689112 15692808 Lan8g0657 8 8782768 8787256 PCT
Lan8g0657 8 8782768 8787256 Lan16g0889 16 15689112 15692808 PCT