Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0539 ATGGCTGCTTCAGCATGCGATCTAAGTCTTTTTTCCCTTTCAACCCTTCCTAGAAACTCTCAAATTCATTTGAAGAATGTAGCTTTTGCTGCATCAATTGTTAACAATCCGAGATTTTGCTTCAACAGAGAAAAATTGAAGGTAAACCATGGACTTAAGGTTCATGCAGTTGTGGAAGTGGGTTTAGAGGGATCAAAGAGTAAAACTTTGGAAGAAACTTTTGGGTTTGATGTAGTTTCAGAAGGAGAGTTGAAAGTGAAGGGGTTTGAAGGGTTGAGAAAGACAAAGCTTGTGTGCACTGTTGGTCCAGCATGTTCATCATTGGAGGAACTAGAGAAGTTGGCACTGTTGGGAATGAATGTTGCAAGGCTCAACATGTGTCATGGTACTAGGGAGTGGCACAGTGATGTGATAAGGAAGATTAAGAAGTTGAATGAGGAAAAGGGTTTCTCTGTTTCTGTTATGATTGATACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGTGCTCCTTTTTCTGTTAAAGTAGAGGAAGATTCCATTTGGCGGTTTACCGTTGAACATTTTGAGGGTTCTCGTCCATTCACCATTCAAGCAAACTATAAAGGTTTTTCTGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGGGGAATGGCACGCTTTGTAGTCACTGAAAAGACTGGAGGTGATTTGCATTGCAAATGCATCGATGCTGGTCTTTTCCTACCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTCCGGAGAAATTACGAGCTCCCCACTCTATCTACAAAGGATTGGGCTGACATTGATTTTGGTATCACTGAGGAAGTTGATTTATTTGCCTTATCCTTTGTCAATAACGCAGATTCTATCAAGGATCTGAAGAACTACCTCTCTACCAAATCAACCAAATCCATAAAAGTATTGGCAAAGATAGAAAACTTAGAAGCCCTTCATAACCTTGAGGAAATAGTGCAAGCTTCAGATGGAATCATGGTGGCTCGTGGTGACCTTGGAGTTGAAATACCACTTGAACAGATCCCTACTGTCCAAGAGGATATAATTAACATTTGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGATTGAATATCCAACACCGACACGTGCTGAGGTGGCAGATGTTTCTGAAGCAGTTCGACAATATGCCGATGCATTGATGTTGTCTGGCGAGTCAGCTATCGGATCATATGGACAGAAAGCTCTGGCAGTCCTGAATATGACCAGCTCTAGAATGGAATCATGGGTTAGAGAGGAAAACAGACAGTCTCTTCTGAATCACCGTCAACTTGGAGCTTCATTGCCAGATCATATCACCGAGCAAATATGCAATTGCGCTGTTGAAATGGCTAACAAGCTTGGCGTGGATGCTATCTTTGTATACACAAAGCATGGATACATGGCATCGCTCCTATCACGCAACCGCCCCAATCCTCCGATCTTTGCTTTCACCGATGATGACAGTACCCGAATGGCTCTGAATTTGCAATGGGGTGTTGTACCCCTCCTTGTTGATTTGTCAGATGATGCAGAATCTAACATTTCAAAATCTATCCAACATATGAAGTCTAAGGGATTGATCAGCCAAGGAGACACTGTTCTAGTGGTTTCAGATGTTGCTCCAACACATGCAACTCATAAGGCTTTTCAGTCAATTCAGGTGAAGACCATTATCTAG 1737 0.4197 MAASACDLSLFSLSTLPRNSQIHLKNVAFAASIVNNPRFCFNREKLKVNHGLKVHAVVEVGLEGSKSKTLEETFGFDVVSEGELKVKGFEGLRKTKLVCTVGPACSSLEELEKLALLGMNVARLNMCHGTREWHSDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPFSVKVEEDSIWRFTVEHFEGSRPFTIQANYKGFSEGIEVGDELVIDGGMARFVVTEKTGGDLHCKCIDAGLFLPGAKFSFWRDGKLVRRNYELPTLSTKDWADIDFGITEEVDLFALSFVNNADSIKDLKNYLSTKSTKSIKVLAKIENLEALHNLEEIVQASDGIMVARGDLGVEIPLEQIPTVQEDIINICRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLNMTSSRMESWVREENRQSLLNHRQLGASLPDHITEQICNCAVEMANKLGVDAIFVYTKHGYMASLLSRNRPNPPIFAFTDDDSTRMALNLQWGVVPLLVDLSDDAESNISKSIQHMKSKGLISQGDTVLVVSDVAPTHATHKAFQSIQVKTII* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0539 578 SUPERFAMILY PK C-terminal domain-like 454 561 IPR036918 -
Lan8g0539 578 PANTHER PYRUVATE KINASE 42 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 ProSitePatterns Pyruvate kinase active site signature. 312 324 IPR018209 GO:0004743|GO:0006096
Lan8g0539 578 SUPERFAMILY PK beta-barrel domain-like 164 246 IPR011037 -
Lan8g0539 578 Gene3D - 162 264 IPR015806 GO:0004743|GO:0006096
Lan8g0539 578 Pfam Pyruvate kinase, alpha/beta domain 460 559 IPR015795 -
Lan8g0539 578 Gene3D - 95 425 IPR040442 -
Lan8g0539 578 PANTHER PYRUVATE KINASE 42 577 - -
Lan8g0539 578 PRINTS Pyruvate kinase family signature 150 166 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 283 297 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 314 340 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 341 365 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 366 390 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 391 409 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 PRINTS Pyruvate kinase family signature 410 426 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 89 437 IPR015813 GO:0003824
Lan8g0539 578 Gene3D - 426 572 IPR036918 -
Lan8g0539 578 Pfam Pyruvate kinase, barrel domain 93 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan8g0539 578 TIGRFAM pyruv_kin: pyruvate kinase 93 576 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0539 Lan-Chr8 7601316 7605766 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0539 K00873 - gmx:100780644 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0308 6 2349531 2363787 Lan8g0539 8 7601316 7605766 PCT