LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan6g0308	ATGGCGTTCACAACCATTCATCTTTCTTCTCCAATATCTTTCTTAAACTCCGATCTCTCTTCTTCAAAGTATCTATCACACCTTGTTTCTTATTCTATTAATCCTCCATCAAAATCCATAACCATGTCGACCATCATCACCTCAATTACCTCCCAAAACGGTTCTCCCCATTTTGGTAAGAAAGATTCTTCGTTTGACTTGGAGTCTAGTAATTATGGTGTTGAACGGGAAGGGACAGATGCAGGTAGGAAAACTAAGATTGTAGGTACAATAGGTCCATCTACTAGTTCACGTGAAATGATTTGGAAACTGGCTGAAACTGGAATGAATGTGGCACGTTTAAATATGTCACACGGGGACCACTCTTCCCACCAGAAAACTATTGATATTGTTAAAGAATATAATGCTCAATTTCCACACAAGGTTATAGCTATCATGCTTGACACCAAGGGCCCTGAGGTTAGAAGTGGGGATGTACCCCAACCAATTTTACTTAAAGAAGGACAAGCATTCAATTTCACCATTAGGAGAGGTATCTGCACAGAAGACACAGTTAGTGTCAATTATGACGATTTTGTGAATGATGTGGAGGTCGGAGACATACTACTCGTTGATGGTGGAATGATGTCACTTGCCGTTAAGTCGAAGACAAAAGACTTGGTTAAATGTGAAGTGGTCGATGGTGGAGAACTGAAATCTAGGCGTCATTTAAATGTTCGTGGAAAAAGTGCAACTCTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTCGACAATCAAGTAGACTTCTATGCTGTCTCATTCGTCAAGGATGCTAGAGTGGTTCACGAGTTGAAAGACTACCTGAAAACTCACAGTGCTGATATAAAAGTGATTGTAAAAATTGAAAGTGCGGATTCCATACAAAATCTTCAATCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGCGGGGACCTTGGAGCTGAGCTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGTCGCAGTATGCAGAAGCCGGTTATTGTGGCAACAAATATGCTGGAAAGCATGATTGATCATCCTACACCAACAAGGGCAGAAGTCTCGGACATTGCAATTGCAGTAAGAGAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACATGGAAAATATCCATTGAAAGCTGTTAAGGTTATGCATACGGTGGCTCAAAGAACTGAAATCAGTATTCCAAGTTGTGATGCTTCTCCAAATCAATCTAGTTCTCATAGAAACCATATGGGAGATATGTTCGCTTTCCATGCAACTACTATGTCTAACACTCTCAATACTCCTATTATTGTTTTCACCCAAACAGGATCCATGGCCATTCATTTGAGCCATTATAGACCTTACTCAACAATCTTTGCATTCACAAATGAAGAAAGGATTAAGCAGAGGTTGGCACTTTATCATGGTGTTGTGCCCATATACATGCAATTCTCAAATGATGCAGAGGAGACCTTTACTAGAGCCCTCCAGCTACTATTGAGTGAGGGTCATTTACTTGAGGGTCAGCAGCATGTTACTCTTGTCCAAAGTGGAGCACAACGAATATGGCGCCAGGAATCCACCCACCACATCCAAGTTCGTAAGGTTCATGGATAA	1668	0.4137	MAFTTIHLSSPISFLNSDLSSSKYLSHLVSYSINPPSKSITMSTIITSITSQNGSPHFGKKDSSFDLESSNYGVEREGTDAGRKTKIVGTIGPSTSSREMIWKLAETGMNVARLNMSHGDHSSHQKTIDIVKEYNAQFPHKVIAIMLDTKGPEVRSGDVPQPILLKEGQAFNFTIRRGICTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCEVVDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKTHSADIKVIVKIESADSIQNLQSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKYPLKAVKVMHTVAQRTEISIPSCDASPNQSSSHRNHMGDMFAFHATTMSNTLNTPIIVFTQTGSMAIHLSHYRPYSTIFAFTNEERIKQRLALYHGVVPIYMQFSNDAEETFTRALQLLLSEGHLLEGQQHVTLVQSGAQRIWRQESTHHIQVRKVHG*	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan6g0308	555	Gene3D	-	83	413	IPR040442	-
	Lan6g0308	555	TIGRFAM	pyruv_kin: pyruvate kinase	83	552	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	SUPERFAMILY	PK C-terminal domain-like	401	553	IPR036918	-
	Lan6g0308	555	Gene3D	-	152	247	IPR015806	GO:0004743\|GO:0006096
	Lan6g0308	555	Pfam	Pyruvate kinase, barrel domain	83	420	IPR015793	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	Gene3D	-	414	531	IPR036918	-
	Lan6g0308	555	Pfam	Pyruvate kinase, alpha/beta domain	444	531	IPR015795	-
	Lan6g0308	555	SUPERFAMILY	PK beta-barrel domain-like	152	243	IPR011037	-
	Lan6g0308	555	PANTHER	PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC	51	553	-	-
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	141	157	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	265	279	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	295	321	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	322	346	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	347	371	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	372	390	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	PRINTS	Pyruvate kinase family signature	391	407	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	ProSitePatterns	Pyruvate kinase active site signature.	293	305	IPR018209	GO:0004743\|GO:0006096
	Lan6g0308	555	PANTHER	PYRUVATE KINASE	51	553	IPR001697	GO:0000287\|GO:0004743\|GO:0006096\|GO:0030955
	Lan6g0308	555	SUPERFAMILY	Phosphoenolpyruvate/pyruvate domain	82	414	IPR015813	GO:0003824

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan6g0308	Lan-Chr6	2349531	2363787	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan6g0308	K00873		-	qsu:112005464	820.076

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan6g0308	6	2349531	2363787	Lan8g0539	8	7601316	7605766	PCT