Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0400 ATGGCAACAATAGCTGGTTTGAGCCTTTCAAGTCCTAGGGTACTTGCCAAGGTTCCAGACTCATCACCACAAAAGGTACAACTCATTAGGTTTCCTTCATTGTTCAAGCTTAACCAAAGGTCTCTGGCCACACATGGGTCAGGCCGAATGATGAGCCTTAGACCCGTGCATGCAGCGCCTGAGAGCATATCGGAGAAGGTGGAGGAGAGTATAAAGAATGCGAAGGAGGCCTGCTCCGATGACCCGGTCAGCGGAGAGTGTGTGGCAGCATGGGATGAGGTGGAGGAGCTGAGCGCGGCTGCGAGCCACGCCCGGGACAAGAAGAAGAGCACTGACCCTCTGGATGCATACTGTAAGGACAACCCTGAGACTGATGAGTGTCGCACCTATGACAATTGA 399 0.5313 MATIAGLSLSSPRVLAKVPDSSPQKVQLIRFPSLFKLNQRSLATHGSGRMMSLRPVHAAPESISEKVEESIKNAKEACSDDPVSGECVAAWDEVEELSAAASHARDKKKSTDPLDAYCKDNPETDECRTYDN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0400 132 Pfam CP12 domain 63 131 - -
Lan8g0400 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
Lan8g0400 132 MobiDBLite consensus disorder prediction 99 132 - -
Lan8g0400 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 - -
Lan8g0400 132 SMART CP12_2 63 132 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0400 Lan-Chr8 6160164 6160807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0400 - - sind:105163045 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0400 8 6160164 6160807 Lan4g1368 4 22628925 22629611 LSH
Lan2g0223 2 1845729 1846292 Lan8g0400 8 6160164 6160807 PCT
Lan8g0400 8 6160164 6160807 Lan2g0223 2 1845729 1846292 PCT