Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0223 ATGGCAACAATGGCTTTTGGAACTACCCTTTCACTCCCCAAGGTTCTTTTCAAATCATCAGAATCACCACAAAACGTTCAACTCATCAAACTCCCACGTTTACTTAGCATGAGACCAGCTACTACAATAGTTTACGCTGCTCCAGAAAGAATATCACAGAAGGTTGAAGAGAGTATAAAGAATGCAAAGGAAACTTGTTCTGATGACCCAACTAGCGGTGAATGTGTGGCGGCGTGGGATGAGGTGGAGGAGCTGAGTGCGGCGGCGAGCCATGCAAGGGATAGGAGTAAGGAGTTATCTGATCCATTGGAGAATTATTGTAAGGATAACCCAGAAACCATTGAGTGCAAAACTTATGATAACTGA 366 0.4399 MATMAFGTTLSLPKVLFKSSESPQNVQLIKLPRLLSMRPATTIVYAAPERISQKVEESIKNAKETCSDDPTSGECVAAWDEVEELSAAASHARDRSKELSDPLENYCKDNPETIECKTYDN* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0223 121 SMART CP12_2 51 121 IPR003823 -
Lan2g0223 121 Pfam CP12 domain 51 120 - -
Lan2g0223 121 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 120 - -
Lan2g0223 121 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 120 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0223 Lan-Chr2 1845729 1846292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0223 - - gmx:100812168 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0223 2 1845729 1846292 Lan8g0400 8 6160164 6160807 PCT
Lan2g0223 2 1845729 1846292 Lan4g1368 4 22628925 22629611 PCT
Lan8g0400 8 6160164 6160807 Lan2g0223 2 1845729 1846292 PCT
Lan4g1368 4 22628925 22629611 Lan2g0223 2 1845729 1846292 PCT