Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0373 ATGTGTTTCATCAACACCATTTCCTTCTTGTCTCAATCTCTCCACTTCTCGAGAATGGAAAATGAAGAAGTTAATGAAGAACACAAGCCTATTATCCAATGGAACAAACAAAAGGGTGGATTCAGAGCTTCAATGTTTATCTTTGTGTTGTCAGCATTGGATAACATGGGATTTGTGGCAAACATGGTGAGCATAGTTCTATACTTTTATATGGTGATGCACTTTGATCTGGCTAGCTCAGCAAATACTCTTACAAACTTTATGGGCTCAACTTTCTTGCTATCTCTTGTTGGTGGATTCATCTCAGATACTTACTTGAATAGACTAACCACATGCTTGATTTTTGGATCACTCGAAGTTCTGGCTTTGGTATTGCTCACAATTCAAGCTGCTTTACCCAAATTACACCCAGATGCTTGTGGAAAATCAAGCTGTGTCAAAGGTGGCATAGAAGTTATGTTTTATGCATCATTGTATATGTTGGCATTGGGTAATGGGGGAGTGAAAGGGTCTATGACTGCATTTGGTGCTGACCAATTTGATGAGAAGGACCCAAATGATGCAAAAGCTCTTCCAACTTTCTTCAATTGGCTTGTGTTGAGTTCAACTTTGGGCTCAGTTATTGGAGTTACTGGTGTTGTGTGGGTTAGCACACAAATAGATTGGCATTGGGGCTTTTTTATAATAACTTTAGCATCCACACTTGGTTATGTTTCCCTTGTTCTTGGCAAGCCATATTACCGCATCAAAAGTCCTGGTGAAAGCCCCATTTTGAGAATTACCCAGGTTATTGTTGTGGCTTTTAAGAACAGAAATCTAACACTGCCAGAGTCTAATGAAGAACTATATGAGATTAGTGCTGAAGATGCTACTGTAGAAAAAGTTGCACATACCAACCAAATGAGGTTTCTAGATAAAGCAACCATTCTTCAAGAAAACTTTGAACCTAAGCCATGGAAAGTATGCACAGTGACACAAGTTGAAGAAGTGAAGATCCTAACTAGAATGTTACCCATACTAGCCAGCACCATTATAATGAACACTTGTTTAGCACAACTTCAAACATTCTCAGTCCAACAAGGGAGTATAATGAACCTAAAACTTGGTTCTTTTACAGTACCCGCACCATCTATTCCTGTTATCCCTCTTATTTTCTTGTGCATCCTGATTCCTATTTATGAGTTCTTCTTTGTGCCACTTGCAAGGAAGATCACTCACCACCCTTCAGGTATTACACAACTTCAAAGAGTTGGTGTAGGACTAGTACTTTCTTCCATTTCAATGGCGATTGCCGGGGTTATCGAAGTAAAAAGAAGGGACCAGAGCAGAAAAGATTCATCACATCCCATAAGTCTATTTTGGCTATCATTCCAATATGCTATATTTGGAATTGCAGATATGTTCACTCTTGTAGGACTCCTAGAATTCTTCTACAGGGAAGCACCTTCAAACATGAAATCATTGTCCACTTCTTTCACATATTTATCTTTGTCACTTGGTTACTTCTTAAGCACGGTCTTCGTCGATGTTATAAACAGTGTTACGAAGAGAATGACTCCAAGCAAACAAGGATGGTTGCATGGATCAGACTTAAACCAAAGCAATCTAAACTTGTTCTTTTGGTTCTTAGCAATCCTTAGCTGCCTCAATTTTTTCAACTTCCTTTACTGGGCCTCTTGGTATAAGTACAAATCTGAAGACAATAATGCAAGGCCAAGTTTGAAGGCCATAGCTGAAACAAAAACGACTCTCAAAAGTGTTGATGAGAAAGCCAAGAAAGATGAAAGCATCAAAGATATTATGAGAGGTAAAGCTAAAGAAAGTAGCCAAACAAGTGAAGCCAATAGTGAGGGACCCTCTTCTTCTGATGAAACAGATGAAGGCAAAGAAAAAGAAGGAAACTATAGATAA 1911 0.3872 MCFINTISFLSQSLHFSRMENEEVNEEHKPIIQWNKQKGGFRASMFIFVLSALDNMGFVANMVSIVLYFYMVMHFDLASSANTLTNFMGSTFLLSLVGGFISDTYLNRLTTCLIFGSLEVLALVLLTIQAALPKLHPDACGKSSCVKGGIEVMFYASLYMLALGNGGVKGSMTAFGADQFDEKDPNDAKALPTFFNWLVLSSTLGSVIGVTGVVWVSTQIDWHWGFFIITLASTLGYVSLVLGKPYYRIKSPGESPILRITQVIVVAFKNRNLTLPESNEELYEISAEDATVEKVAHTNQMRFLDKATILQENFEPKPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGSIMNLKLGSFTVPAPSIPVIPLIFLCILIPIYEFFFVPLARKITHHPSGITQLQRVGVGLVLSSISMAIAGVIEVKRRDQSRKDSSHPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSNMKSLSTSFTYLSLSLGYFLSTVFVDVINSVTKRMTPSKQGWLHGSDLNQSNLNLFFWFLAILSCLNFFNFLYWASWYKYKSEDNNARPSLKAIAETKTTLKSVDEKAKKDESIKDIMRGKAKESSQTSEANSEGPSSSDETDEGKEKEGNYR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0373 636 Gene3D MFS general substrate transporter like domains 14 570 IPR036259 -
Lan8g0373 636 SUPERFAMILY MFS general substrate transporter 19 567 IPR036259 -
Lan8g0373 636 MobiDBLite consensus disorder prediction 584 636 - -
Lan8g0373 636 MobiDBLite consensus disorder prediction 622 636 - -
Lan8g0373 636 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lan8g0373 636 MobiDBLite consensus disorder prediction 584 606 - -
Lan8g0373 636 Pfam POT family 111 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lan8g0373 636 PANTHER PEPTIDE/NITRATE TRANSPORTER 28 575 - -
Lan8g0373 636 MobiDBLite consensus disorder prediction 607 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0373 Lan-Chr8 5871853 5875297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0373 17 569 Organic Solute Cotransporters AT1G59740 42.361 1.62e-151 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0373 K14638 - gmx:100812867 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0373 8 5871853 5875297 Lan20g0586 20 4540907 4544239 LSH
Lan2g0250 2 2084135 2087729 Lan8g0373 8 5871853 5875297 PCT
Lan8g0373 8 5871853 5875297 Lan2g0250 2 2084135 2087729 PCT