Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0586 ATGTGTTTCACAAACGCCATTTTCTTCTTGTCTCAACCTCTCCACTTCTCGAAAATGGAAAATGAAGAAGTGAATGAAGAACACAAGCCTATTATCCAATGGAAGAAACAAAAGGGTGGATTCCGTGCTTCAATGTTTATCTTTGTGTTATCAGCATTGGATAACATGGGATTTGTGGCAAACATGGTGAGCATAGTGCTATACTTTTATGGGGTTATGCACTTTGATCTAGCTAGTTCAGCGAACACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTCTCTCTTGTTGGTGGATTCATCTCAGATACTTATTTGAATAGACTAACTACTTGCTTGATTTTTGGATCACTGGAAGTACTGGCTTTGGTATTGCTCACAATTCAAGCTGCTTTACCCCATTTACACCCAAATGCGTGTGGAAAACCAAGCTGTGTCAAAGGTGGCATAGCAGTTATGTTTTATGCATCATTGTATATGTTGGCATTGGGTAATGGAGGAGTGAAAGGGTCTATGACTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAAATGATGCAAAAGCTATTGCTAGTTTCTTCAATTGGCTTCTGCTGAGTTCAACTTTGGGGTCAGTAATTGGAGTTACTGGTGTTGTTTGGGTTAGCACACAAAGAGATTGGCATTGGGGATTTTTCATTATAACTTTAGCTTCATCACTTGGTTTTGTTACCCTTGCTCTTGGGAAACCATTTTACCGCATCAATAGTCCTGGTGAAAGCCCCATCTTGAGAATTGCTCAGGTTATTGTTGTGGCATTTAAGAACAGAAAGCTAACATTGCCGGAGTCGAATGAAGAACTTTATGAGATTGGTGATAAAGATGCTACAATAGATAAGATATCACACACCAACCAAATGAGGTTTCTAGATAAAGCAACCATTTTCCGAGAAAACTTCGAACGGAAGCCGTGGAAAATATGCACAGTGACACAAGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCAATACTTGCCAGCACCATTATAATGAATACTTGTTTAGCACAGCTTCAAACATTTTCAGTCCAGCAAGGGAGTATAATGAACCTGAAACTTGGTTCTTTTACAGTGTCATCACCATCCATTCCTGTTATCCCTCTTGTTTTCTTGTGCATCCTGATTCCCCTATATGAGTTCTTCTTTGTTCCATTTGCAAGAAAGATCTCTCACCACCCTTCAGGTGTTACACACCTTCAAAGAGTGGGTGTTGGGCTAGTACTTTCTTCCATTTCAATGGCAATAGCTGGGGTTATAGAAGTAAAAAGAAGGAACCAAAGCATAAAAGACTCATCACATCCCATAAGTCTTTTTTGGCTGTCATTCCAATATGCTATATTTGGGATTGCAGATATGTTCACTCTTGTAGGACTCCTAGAATTCTTCTATAGGGAAGCACCTTCAAACATGAAATCATTGTCCACTTCTTTCACATATTTATCCATGTCACTTGGCTACTTTTTGAGCACTGTCTTTGTCAATGTCATAAATAGTGTTACCAAGAGAATCACTCCAAGCAAAAAAGGATGGTTGCAGGGATCTGACTTAAACCAAAGCAATTTAAACTTGTTCTTTTGGTTCTTAGCAATCCTTAGTTGCCTTAATTTTCTAAACTTCCTTTACTGGGCTTCTTGGTACAAGTACAAATCTGAAGATAGGAATTCAAGGCCAGATTTGAAGACTATAGCTGAAACAAAAACAACTCTCAAAATGGTTGATGATGAGAAAGCCAAGAAGGGTGAAAGCATCAAAGATATTATGGCAGGTAAGGCTAAAGAAAGCAGCCAAACAAGTGAAGCCAATAGTGAGGGACCCTCTTCTTCTGATGAAGGCAAAGAAAAAGAAGGAAAGTATAGAGAACTGAAATCTAGATAA 1920 0.3891 MCFTNAIFFLSQPLHFSKMENEEVNEEHKPIIQWKKQKGGFRASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTFLLSLVGGFISDTYLNRLTTCLIFGSLEVLALVLLTIQAALPHLHPNACGKPSCVKGGIAVMFYASLYMLALGNGGVKGSMTAFGADQFDEKDPNDAKAIASFFNWLLLSSTLGSVIGVTGVVWVSTQRDWHWGFFIITLASSLGFVTLALGKPFYRINSPGESPILRIAQVIVVAFKNRKLTLPESNEELYEIGDKDATIDKISHTNQMRFLDKATIFRENFERKPWKICTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGSIMNLKLGSFTVSSPSIPVIPLVFLCILIPLYEFFFVPFARKISHHPSGVTHLQRVGVGLVLSSISMAIAGVIEVKRRNQSIKDSSHPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSNMKSLSTSFTYLSMSLGYFLSTVFVNVINSVTKRITPSKKGWLQGSDLNQSNLNLFFWFLAILSCLNFLNFLYWASWYKYKSEDRNSRPDLKTIAETKTTLKMVDDEKAKKGESIKDIMAGKAKESSQTSEANSEGPSSSDEGKEKEGKYRELKSR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0586 639 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 575 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lan20g0586 639 MobiDBLite consensus disorder prediction 595 639 - -
Lan20g0586 639 PANTHER PEPTIDE/NITRATE TRANSPORTER 28 575 - -
Lan20g0586 639 MobiDBLite consensus disorder prediction 606 620 - -
Lan20g0586 639 SUPERFAMILY MFS general substrate transporter 21 567 IPR036259 -
Lan20g0586 639 MobiDBLite consensus disorder prediction 621 639 - -
Lan20g0586 639 Gene3D MFS general substrate transporter like domains 15 570 IPR036259 -
Lan20g0586 639 Pfam POT family 111 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0586 Lan-Chr20 4540907 4544239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0586 17 570 Organic Solute Cotransporters AT1G59740 42.142 2.48e-151 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0586 K14638 - gmx:100817702 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0373 8 5871853 5875297 Lan20g0586 20 4540907 4544239 LSH
Lan2g0250 2 2084135 2087729 Lan20g0586 20 4540907 4544239 PCT
Lan20g0586 20 4540907 4544239 Lan2g0250 2 2084135 2087729 PCT