Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1426 ATGGAGATATTTAGAGTTCGCATTATTTCTTTTATCTTTCTTCTGATTCTGACTGAAACTTTATGTTCCAATGCATTTGGTGGTAGTATGAAGAATGAGGAAGACCTCAAGGAAGGGCAAAATGATATTGTAAATTCTATCTCAAATTATGGTGAAATGAAAGAAGATGAATGGGAAATGGTACAAAAGAGAGGGAATCAATTTGTGGTGAATGAGCAACCTTTCTATGTGAATGGATTCAATACTTATTGGCTAATGGTATTTGCTGCTGATGAGTCTACAAAAGGGAAGGTAACTGATGTGTTCAAACAAGCATCTTCAATGGGTTTAACAGTTTGTAGGACTTGGGCTTTCAATGATGGCCAATGGAGGGCTCTACAGAAATCTCCTTCTGTTTATGATGAAAATGTCTTCAAGGCCTTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAGATAAGGCTAATATTATCATTGAGCAATAACTGGGAGGCATATGGAGGGAAAGCACAGTATGTGAAATGGGGCAAAGAAGCTGGACTTCATAACTTGACCTCTGATGATGACTTCTTCTCACACCCAACTCTTAGAACCTACTACAAGGCCCATGTTAAGACGGTTCTCAATAGAGTCAATACATTCACAAATATCACTTACAAGGAAGATCCAACAATTTTTGCTTGGGAACTCATGAATGAGCCTCGATGCAACTCTGATCCCTCAGGTGATAAGTTACAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACATCTAGTGGAGGTTGGACTTGAAGGATTCTATGGACCCTCAACACCTCAAAGGGTTCAGTTCAACCCAAATACATATGCTCAACAGGTTGGAACAGACTTTATCAGGAACCATCTGGTTCTTGGTATTGACTTTGCTTCTGTTCACATGTATGCAGACTCTTGGATTTCACAACAAATTTCTGATACACATATCCCATTTGTAAAATCATGGATGGAAGCACACATAGAGGATGCTGAAAAGCATCTTAATATGCCAGTTCTTTTGACTGAGTTTGGTGTTTCTTCAAAAGATCCTGGATACAATTCATCATATAGAGACACACTTATAAGCACTGTGTACAACACAATCTTGAACTCTACAAGGAAAGGAGGGAGTGGTGCTGGAAGCCTTTTATGGCAGGTGTTTCCTGATGGAACAGATAATATGGATGATGGCTATGGAATTGTTTTCTCAAAATTTACTTCAACCTCAAGTATTGTGTCCCTTCAATCCAATAGGATGAAATTATTCAACTCCTTATGCTCTTCCAAATGCAATTGGAGTTGTAAGAAAAAGAATGTGTTGGAGAAGACACTCTACCATGATGAACTCTAA 1383 0.3832 MEIFRVRIISFIFLLILTETLCSNAFGGSMKNEEDLKEGQNDIVNSISNYGEMKEDEWEMVQKRGNQFVVNEQPFYVNGFNTYWLMVFAADESTKGKVTDVFKQASSMGLTVCRTWAFNDGQWRALQKSPSVYDENVFKALDFVVSEAKKYKIRLILSLSNNWEAYGGKAQYVKWGKEAGLHNLTSDDDFFSHPTLRTYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCNSDPSGDKLQDWIQEMAFHVKKIDPKHLVEVGLEGFYGPSTPQRVQFNPNTYAQQVGTDFIRNHLVLGIDFASVHMYADSWISQQISDTHIPFVKSWMEAHIEDAEKHLNMPVLLTEFGVSSKDPGYNSSYRDTLISTVYNTILNSTRKGGSGAGSLLWQVFPDGTDNMDDGYGIVFSKFTSTSSIVSLQSNRMKLFNSLCSSKCNWSCKKKNVLEKTLYHDEL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1426 460 Pfam Cellulase (glycosyl hydrolase family 5) 71 373 IPR001547 GO:0004553|GO:0071704
Lan7g1426 460 PANTHER - 8 460 IPR045053 GO:0004553
Lan7g1426 460 SUPERFAMILY (Trans)glycosidases 60 425 IPR017853 -
Lan7g1426 460 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 460 - -
Lan7g1426 460 Gene3D Glycosidases 58 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1426 Lan-Chr7 19725692 19728184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1426 4 460 Glycoside Hydrolase AT5G01930 66.013 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1426 K19355 - gmx:100811794 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1426 7 19725692 19728184 Lan12g0138 12 1586646 1589084 PCT
Lan12g0138 12 1586646 1589084 Lan7g1426 7 19725692 19728184 PCT