Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1372 ATGGAAACACTCACTAGCTCTTGTTCAAAGGCTATTGTTAAGAGTCTAGGATCATGTTTTCCTAGAGGTGCTGCTTTTGGTTCTGATAGACCCAAAATTTGTTTCTCTTCAAATGAGAAAAAAGGTTGCAACTTTCAGGTCCTGAAACTTGTACAAAACAAGGGTATTTACCCAATTTATGCTGTGAAATCTGAAACTAAGAGTATGTTGCAGCTGGACTTGGACACTGAAAAGCTTGAAGCTCTACAAACAAATGAACTGAAGAGCATCCATGTCAAATTTCAGTTACAAAAGGATTGCGCCTTCGGGGAACAATTTCTTTTAGTTGGAGATGATCCAATGTTTGGTTCATGGAACCCTTCAAATGCATTACCAATGACTTGGTCTGATGGCCATGTATGGACCACCCACCTGAACATACCTGTTGGAAAGCCAATCCAATTCAAGTTCATACTGAAAGGGAAAACCGGAGATATTATTTGGCAGCCCGGCCCGGATAGAATTTTGCACACTTGGGAAGCTATGACAAGAATAACTGTTTGTGAGGATTGGGACAATGCTGAATCTCAGAAACTAATAGAGGAATATCAATATCCCTACTCAGATGAGGAACCTATGATTGAATCAAATGCTGAACATAGCCAAACTCATGCAAAGGAGCAGATAATTTCCTTGGAGGAGATCATCAAGAATGCAGAACACATAATGACTGAAAGGAAAATGATGAAACAGAATGAAGAATCTTCAAAGAGCTCTGAAAATGGTGTACTCAGACACAAAGGAAAAGCTGCACCAGTCAAGAAACCGAAAAGGTCATAG 819 0.398 METLTSSCSKAIVKSLGSCFPRGAAFGSDRPKICFSSNEKKGCNFQVLKLVQNKGIYPIYAVKSETKSMLQLDLDTEKLEALQTNELKSIHVKFQLQKDCAFGEQFLLVGDDPMFGSWNPSNALPMTWSDGHVWTTHLNIPVGKPIQFKFILKGKTGDIIWQPGPDRILHTWEAMTRITVCEDWDNAESQKLIEEYQYPYSDEEPMIESNAEHSQTHAKEQIISLEEIIKNAEHIMTERKMMKQNEESSKSSENGVLRHKGKAAPVKKPKRS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1372 272 MobiDBLite consensus disorder prediction 238 272 - -
Lan7g1372 272 MobiDBLite consensus disorder prediction 238 257 - -
Lan7g1372 272 Gene3D Immunoglobulins 87 185 IPR013783 -
Lan7g1372 272 CDD CBM20 92 184 - -
Lan7g1372 272 SUPERFAMILY Starch-binding domain-like 90 181 IPR013784 GO:0030246
Lan7g1372 272 Pfam Starch binding domain 90 176 IPR002044 GO:2001070
Lan7g1372 272 PANTHER OS01G0856900 PROTEIN 1 254 - -
Lan7g1372 272 PANTHER ALPHA-AMYLASE 1 254 - -
Lan7g1372 272 SMART CBM_20_2 89 181 IPR002044 GO:2001070
Lan7g1372 272 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 84 186 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1372 Lan-Chr7 19055164 19056938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1372 - - lang:109352639 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1372 7 19055164 19056938 Lan11g1706 11 33370306 33372590 LSH
Lan7g1372 7 19055164 19056938 Lan12g0239 12 5168767 5172443 PCT
Lan12g0239 12 5168767 5172443 Lan7g1372 7 19055164 19056938 PCT