Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1367 ATGAACACTGTTACTTCTTCTCTCTCTATAAACCCCACTTTCTCCCCTTCAATTCTCTCAATTCCCACTTCATCTTCTTCTTCATATTCATATTCATACAATTATCTTCCCAATTCGTTTGGACCAAAACCCATTATTCTTTCTTCCATAGGAACACGGTTATGCTCTTTGCAGGGTCCAAAAAGTTTGAAAAATAGAAAAAGTTTCGAACTTGAAGCTGGAAACATGAGTGTGGAAGAGTTTGATTTGCATAATGAGAAGGGGGAAGAAGAGGGTGCTACTAATTCTTCTTTGATTGACTCTGGAAAGGTTTCAAGGCCTAGAAGAATTGCACTTTTCGTTGAACCTTCTCCTTTTTCATATGTCTCAGGATACAAAAACCGGTTTCAAAATTTTATTAAATACCTCCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACACATAAAGGACTTCCTGAAGAATTTCACGGAGCGAAATTAATTGGATCCAAGAGCTTTCCATGTCCTTACTATCAGAAGGTACCCCTCTCCTTAGCACTTAGTCCGAGAATAATTTCAGAGGTAGCCCAGTTTAAGCCTGATATAATACATGCATCATCTCCAGGCATAATGGTTTTCGGTGCCCTTATCATTGCAAAACTTTTATCCGTTCCTATTGTCATGTCCTATCATACGCACGTACCAGTGTACATTCCAAGATATACCTTTAGCTGGCTAGTGAAACCCATGTGGTGGGTCATAAAATTTCTCCACACAGCAGCTGATCTGACTTTGGTGCCATCAGCTGCCATTGGAAGGGAACTCCAAGCTGCTAAAGTAACAGCAGCTAACAGGATTCGTCTTTGGAATAAGGGTGTTGATTCCGATAGTTTCCATCCGAGATACCGCTCGGATGAAATGCGATTAAGACTAAGCAATGGCGAACCCGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGATTTGAGAAGAGTTTAGATTTTATCAAAAGGATCATGGATAACCTTCCCGAAGTGCGAATTGCTTTTATTGGAGATGGCCCATACAGGGAGGAGCTGGAGAAAATGTTTGAAGGTATGCCTGCAGTGTTCACCGGAATGTTAGGAGGGGAAGAACTCTCTCAAGCATATGCAAGTGGAGATGTTTTTGTCATGCCTTCAGAGTCGGAAACACTTGGCCTCGTTGTTTTAGAGGCGATGTCTTCAGGGATTCCCGTAGTAGGAGCACGTGCCGGAGGAATTCCAGATATAATCCCTGCAGAACAAGAGGGCAAAACTGGCTACCTATATAATCCAGGCGACCTTGACGACTGCTTAAGCAAACTAAAGCCTCTGTTGTTCGATAAAGAATTCAGAGAACAAATGGGAAAAGCCGCACGTAAAGAGACAGAAAAGTACGATTGGAAGGCAGCCACTCACAACATTCGCAACCAACAATACAACGCTGCGATTTGGTTCTGGCGAAAGAAAAGAGCTCAACTATTGAGACCCTTTCAGTGGTTGACGAAACGGATTTTCGCATCACCAGCCGTCAACTATAGGTGA 1548 0.427 MNTVTSSLSINPTFSPSILSIPTSSSSSYSYSYNYLPNSFGPKPIILSSIGTRLCSLQGPKSLKNRKSFELEAGNMSVEEFDLHNEKGEEEGATNSSLIDSGKVSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHKGLPEEFHGAKLIGSKSFPCPYYQKVPLSLALSPRIISEVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVKPMWWVIKFLHTAADLTLVPSAAIGRELQAAKVTAANRIRLWNKGVDSDSFHPRYRSDEMRLRLSNGEPEKPLIVHVGRLGFEKSLDFIKRIMDNLPEVRIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPAEQEGKTGYLYNPGDLDDCLSKLKPLLFDKEFREQMGKAARKETEKYDWKAATHNIRNQQYNAAIWFWRKKRAQLLRPFQWLTKRIFASPAVNYR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1367 515 Pfam Glycosyl transferases group 1 310 462 IPR001296 GO:0016757
Lan7g1367 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 476 - -
Lan7g1367 515 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 22 514 - -
Lan7g1367 515 CDD GT4-like 109 481 - -
Lan7g1367 515 Pfam Glycosyltransferase Family 4 127 290 IPR028098 -
Lan7g1367 515 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 22 514 - -
Lan7g1367 515 Gene3D Glycogen Phosphorylase B; 287 467 - -
Lan7g1367 515 Gene3D Glycogen Phosphorylase B; 123 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1367 Lan-Chr7 18874179 18878717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1367 87 423 Glycosyltransferase AT5G01220 79.822 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1367 K06119 - gmx:100780899 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1367 7 18874179 18878717 Lan1g0856 1 19398839 19403468 PCT
Lan1g0856 1 19398839 19403468 Lan7g1367 7 18874179 18878717 PCT