Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0464 ATGGCTACCCAAAACAACAACATGAATGAGATTGCACATGCCACCCACGTGGAGTCTGAGCTTAACCCTAATTCTATTCAAGATGGCAAGTGTCAGGGGAATGGTAACAAGGATGAGATTGAAACTGAAAACGAAGATTCAATTTCTGAACAAAGTAGTAGCAGTAGTGATAGTGAGGAAAGGGATGAAGATGAAGATGAAGATGATGAAAGTGTAAGTGACGATGGTGGAGATGCAGAGAAGATGCTTACTTGGGGTTTGGTTGATGATGCTGATGGTGAAAGAGGAGGAGAACCCACCAGGTCAAAAAATGAGCTTCAGAATCTGCCTCCAGTTCCTCCAGTTGAGGTGACTTTAGAGCCGCACCATCACGTGCAGCCTGTGGGAGTTATTATGTCGATTCTCAGTGCTCAAGTTATTGTGGAAGGAGTGGAAAAGCATGAGCCTCTTAATGAGGGTTCTATCCTCTGGGTGACTGAAAGCCAAAAACCACTTGGGTTAATTGACGATATCTTCGGACCAGTAAAAAAGCCATACTATATTGTGAGATACAATTCTGAAAATGAAGTTCCTGAAGGGATCGGTGCGGGAACTTTGATCTCATTTGTTCCAGAATTTGCAGATTATGTGCTTAATAACAAGGATGTTAATAAGAAAGGGTATGATGCATCTGGTGCGAATGATGAAGAGTTGTCTGATGAATATGAGTTTTCAGATGATGAAAAAGAGGCTGAATACAGAAGAGTGCAAAGAGCAACAAGGAGAGACAAAACTGATCAAAATCAGGGCAAGAGAAAAATCATTAGAAAGAAAGGTCCACTAAATCAGAATGTGGTCCCTTCCATCCCTGATGCACCTGCACCGCCATTGCTTGATCATGGAATTTCTTCACCTTTTTCAGGCAACCGGCAAGGAAATTTTGGGGGAACAACTATGCCCATACCATTTCCCATTCCACCCTCAAATGCTGGTCCCAACTTATTTTCAAATGGAATTTGGACAAATGGGGCAACAGTTCCACAGCAACCACAACCTTCACCACCTCCTAATGCATTTCCTTCAGATGGCATGCCATGGTACCCACAAAACACTCAAATTCCTCATCAGTTGCCTATGCTTCAATTTCAACAGCTGTTGCATCCCAGTCAGGGACCTCTTTCGCCAGTCATGTTTCCTGGGGTACTGCCCAATATATTTGCACAACCCATGTATGCACAAGGGCTTGTTGGTCCAAACCAAATGCCATTTGGAATGAACACACCCTTTGGGCAGATTCAGTCACCTATCTTTGCTGCACAACAGGGTTTCCCGTCCGGTGAATTGCAGTCTCAAGGAAACCTTAATTTGCATTCTAATACTATTCCTTCTGCCCCCCCTCAATTACGTCCTAGCACATCTGCTGGTCGTAGTAGTCATGGGAGAACATTTCATGCAGCGGGTAGGAAAGGGTCCCGACCAGCTAGGTGA 1467 0.4417 MATQNNNMNEIAHATHVESELNPNSIQDGKCQGNGNKDEIETENEDSISEQSSSSSDSEERDEDEDEDDESVSDDGGDAEKMLTWGLVDDADGERGGEPTRSKNELQNLPPVPPVEVTLEPHHHVQPVGVIMSILSAQVIVEGVEKHEPLNEGSILWVTESQKPLGLIDDIFGPVKKPYYIVRYNSENEVPEGIGAGTLISFVPEFADYVLNNKDVNKKGYDASGANDEELSDEYEFSDDEKEAEYRRVQRATRRDKTDQNQGKRKIIRKKGPLNQNVVPSIPDAPAPPLLDHGISSPFSGNRQGNFGGTTMPIPFPIPPSNAGPNLFSNGIWTNGATVPQQPQPSPPPNAFPSDGMPWYPQNTQIPHQLPMLQFQQLLHPSQGPLSPVMFPGVLPNIFAQPMYAQGLVGPNQMPFGMNTPFGQIQSPIFAAQQGFPSGELQSQGNLNLHSNTIPSAPPQLRPSTSAGRSSHGRTFHAAGRKGSRPAR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0464 488 Gene3D Probable tRNA pseudouridine synthase domain 98 203 IPR038664 -
Lan7g0464 488 Pfam Gar1/Naf1 RNA binding region 125 210 IPR007504 GO:0001522|GO:0042254
Lan7g0464 488 MobiDBLite consensus disorder prediction 241 266 - -
Lan7g0464 488 MobiDBLite consensus disorder prediction 436 488 - -
Lan7g0464 488 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 12 472 - -
Lan7g0464 488 SUPERFAMILY Translation proteins 125 188 IPR009000 -
Lan7g0464 488 MobiDBLite consensus disorder prediction 219 287 - -
Lan7g0464 488 MobiDBLite consensus disorder prediction 1 110 - -
Lan7g0464 488 MobiDBLite consensus disorder prediction 57 75 - -
Lan7g0464 488 MobiDBLite consensus disorder prediction 1 32 - -
Lan7g0464 488 MobiDBLite consensus disorder prediction 85 101 - -
Lan7g0464 488 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 12 472 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Lan7g0464 488 MobiDBLite consensus disorder prediction 436 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0464 Lan-Chr7 3396915 3399285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0464 K14763 - gmx:102660668 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0464 7 3396915 3399285 Lan13g0486 13 3594003 3597227 LSH